Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1439 |
Symbol | |
ID | 3850023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 1625456 |
End bp | 1627027 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637841111 |
Product | TnpC protein |
Protein accession | YP_441985 |
Protein GI | 83720603 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCGG CCAACGCCTA TCCGGACGAC ATCGAAGCGC TCAAAGCCAT GCTGCTCGAG CGCGATGCTC GCATTGGGCA TCTCGAGGAC GTAGTCGAAT CGCACAAGGC GGCGAACGCC ACCGCCAAGG CAGAGATCGA GCATCTGAAG CTGCTGATTG CGAAGCTGCG CCGCATGCAG TTCGGTCGCA AGTCGGAGAA GCTCGATCGT CAGATCGAAC AACTCGAACT GCGTCTGGAA GAACTCGAAG CGGACGAAGG CGCGGCTCCG ATCGAAATCC CGAAGACACC TCGTACCGCG CCGGAACAGT CGCCTCGCAA GCCGCTGCCC GAGCATCTGC CACGTGAAGA GCAAACGCAC TTGCCGCAAT CGACCGAGAC GTGCTCGGAA TGCGGCGGCA AGCTCAAGCT GCTAGGCGAA GACGTCTCCG AACAACTTGA ATATGTACCT GCGAGCTTCC GCGTAATCCG TCATGTGCGG CCCAAGTTCG CCTGCGCGTG CTGCGATCAC ATCGCGCAAG CAGCAGCGCC GAGTCGTCCC ATCGAGCGCG GCCTGGCGGG CCCTGGACTA CTCGCGCACG TGCTGGTCTC GAAGTTCGCA GACCACATCC CGCTGTATCG GCAGTCGGTC ATGTATGCGC GTGAAGGCGT CGAACTCGAC CGCTCGTTGC TCGCGAAGTG GGTCGGCCAC GGCGCGACGC TTTTACAACC ACTGGTCGAT GCATTACGCC GTCATGTGAT GACCGGGACG AAGCTGCATG CCGACGACAC GCCGGTCCCA GTGCTCGAAC CGGGCAACGG CAAGACGAAG ACTGGCCGCT TGTGGGTCTA TGTGCGTGAC GATCGATCGT CAGCCGATAT GACGCCGCCA GCGGTGTGGT TCGCTTACAC GCCGGATCGC AAAGGCATCC ATCCGCAACA ACATCTCGAG ACGTTCAGCG GCACGCTGCA AGCGGACGCC TATGGCGGCT ACCAGGCTAT CTACGAGACC GGACGCGTGA GGGAAGCTGC CTGCTGGGCG CATGCCCGAC GCCAGTTCTA TGAGCTACAC GCTGCGCGCC CGAACGCATT GAATACCGAA GCGCTCGAGC GTATCGGTGC GTTGTACAAG ATCGAAGACG CGATACGCGG CAAACCGCCC GACGAGCGTC GTGCGTATCG AGAAGCACAT GCCCGACCGC TTCTCAGTCA GCTTCACGCC TGGCTCACCG CCACGCTGGA GACACTCTCA AAGAAATCCG ATACGAGTCG GGCGATTCTC TATGCGCTGA ACCGATGGGA AGCGCTCACA CGCTATTGCG ACGACGGCCA ACTCGAGATC GATAACCTGC CGGTCGAGCG AGCGTTGCGT GGAGTGGCCA TCGGGAGGCG GAATTACCTG TTCGCCGGTG CCGACTCCGG CGGCGAGCGC GCTGCCGCGA TCTATAGCCT CATCGGAACG GCGAAGCTCA ACGGCATCGA TCCCGAGGCG TATCTGCGCT TCGTCCTTGC CCGCATTGCT GATCACGCAA TCAATCGTGT CGATCAGCTC ATGCCGTGGG CCATAGCTGA TCAACTCCGC GACGACAGCT GA
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Protein sequence | MTAANAYPDD IEALKAMLLE RDARIGHLED VVESHKAANA TAKAEIEHLK LLIAKLRRMQ FGRKSEKLDR QIEQLELRLE ELEADEGAAP IEIPKTPRTA PEQSPRKPLP EHLPREEQTH LPQSTETCSE CGGKLKLLGE DVSEQLEYVP ASFRVIRHVR PKFACACCDH IAQAAAPSRP IERGLAGPGL LAHVLVSKFA DHIPLYRQSV MYAREGVELD RSLLAKWVGH GATLLQPLVD ALRRHVMTGT KLHADDTPVP VLEPGNGKTK TGRLWVYVRD DRSSADMTPP AVWFAYTPDR KGIHPQQHLE TFSGTLQADA YGGYQAIYET GRVREAACWA HARRQFYELH AARPNALNTE ALERIGALYK IEDAIRGKPP DERRAYREAH ARPLLSQLHA WLTATLETLS KKSDTSRAIL YALNRWEALT RYCDDGQLEI DNLPVERALR GVAIGRRNYL FAGADSGGER AAAIYSLIGT AKLNGIDPEA YLRFVLARIA DHAINRVDQL MPWAIADQLR DDS
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