| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1418 |
|---|
| Symbol | |
|---|
| ID | 3848087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 1599022 |
|---|
| End bp | 1600356 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637841090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_441964 |
|---|
| Protein GI | 83720665 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAG AACCCACCCG CCGTTACCGG CCGCATCGCA TCGTCGCGCG CTTCGTCGCG
GTGTCGTGGC GCGATCTCGC GATGTCGATC GGGCCGACCG TCGTGCTCTC GGCGGCCGCG
ATCTGGCTCG CGATCGCGCT GATCCAGCCC GCGCCGCCGA CATCGCTGAC AATCTCCGCG
AGCCCGCCCG GCAGCACGAA CTGGCGCGCG GCGCAGCGCT ACAAGCAAAT CCTCGCGAAG
AACGGCGTGA CGCTCGACGT GCTCGAATCC GAGGGCTCGG CCGAGAATCT CGCGCGGCTG
TCGGACCCGG CGCGGAAGGT CGACGTCGGC TTCGTGCAGA GCGGCATCGA GCGGAAGGAA
ACGCACGAGG GTCTCGTCTC GCTCGGCAGC GTCGGCTACG TGCCGCTCGC GATCCTCTAT
CGCGGGCCCG TGATCGAGCG GCTGTCGCAG TTCAAGGGCA AGCGGCTCGC GCTCGGGGCC
GAAGGCGCGG GCGCGCACGA GCTCGGCCTC GCGCTCCTGA AGATGAACGG CATCGCGCCG
GGCGGCTCGA CCGCGCTGCT GCCGCTGTCC GGCGAGGACG CCGCACGCGC GCTGACCGAA
GGCCGCATCG ACGCGGCGTT CCTGTCCGGC GACTCGACGC AGATCCCCGT GATGGCGAAG
CTGTTCCGCG CGCCCGGCGT GCATTTCTAT TCATTCACGC AAGCCGAGGC GTACACGCGG
CGCTTCCCGT ACCTCACCGA CATCACGCTG CCGATGGGCG TGTACGATCC GGGCACGAAC
CTGCCGCCGT CGGACATCCA CACGCTGTCG CCGACCGTCG AGCTGATCGC GCGCGACACG
CTGCATCCCG CGCTGTCGGA CCTGCTCATC GAGGCCGCGC GCTACTACAA ATCCGGCAAG
ACGTTCCTCT ACCGAAAGCT GCCGTTCTGG GTGGCGAGCC TCGCCGATCG GCTGCTCTTC
ATCGTCGTGC CGCTCATCGT GGTGCTGATT CCGGGGCTGC GGCTCGTGCC GGCGCTGTAC
GGCTGGCGCG TGCGTTCGCG AATCTACCGA TGGTACGGCG CGCTCATCGC GCTCGAGCGC
AGCGCGCTCG GCGAGCACAC CGCGCAAGAG CGCGTCATGC TGCTCGACAG GCTCGACGAC
GTCGAGGAAT CGGTCAACCG GATGAAAATG CCGCTCGCGT ATGCCGGCCA GTTCTACGTG
CTGCGCGAAC ACATCGGCTT CGTGCGCGAA CGGCTGCTCT CGCGCGAGTA CGAAACGCCC
CAATCCGCCT CGCCGGCCGC GCGGAAATCC GCCGGCGCGC CGCCCGCCGA TTCGCGCCCG
CCCGGCGACG CTTGA
|
|---|
| Protein sequence | MKPEPTRRYR PHRIVARFVA VSWRDLAMSI GPTVVLSAAA IWLAIALIQP APPTSLTISA
SPPGSTNWRA AQRYKQILAK NGVTLDVLES EGSAENLARL SDPARKVDVG FVQSGIERKE
THEGLVSLGS VGYVPLAILY RGPVIERLSQ FKGKRLALGA EGAGAHELGL ALLKMNGIAP
GGSTALLPLS GEDAARALTE GRIDAAFLSG DSTQIPVMAK LFRAPGVHFY SFTQAEAYTR
RFPYLTDITL PMGVYDPGTN LPPSDIHTLS PTVELIARDT LHPALSDLLI EAARYYKSGK
TFLYRKLPFW VASLADRLLF IVVPLIVVLI PGLRLVPALY GWRVRSRIYR WYGALIALER
SALGEHTAQE RVMLLDRLDD VEESVNRMKM PLAYAGQFYV LREHIGFVRE RLLSREYETP
QSASPAARKS AGAPPADSRP PGDA
|
|---|
| |