| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1390 |
|---|
| Symbol | |
|---|
| ID | 3847373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 1563038 |
|---|
| End bp | 1564225 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637841062 |
|---|
| Product | glutaryl-CoA dehydrogenase |
|---|
| Protein accession | YP_441936 |
|---|
| Protein GI | 83718837 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG CAACCTTCCA TTGGGACGAT CCGCTGCTGC TCGACCTGCA GCTCAGCGAC
GACGAGCGCA TCGTGCGCGA CGCCGCGAAC GCTTACGCGC AGGGCAAGCT CGCGCCGCGC
GTGACGGAAG CGTTCCGCCA CGAGACCACG GATGCGGCGA TCTTCCGCGA AATGGGCGAG
GTCGGCCTCC TCGGCCCGAC GATTCCCGAG GCGTACGGCG GCCCCGGCTT GAGCTACGTG
AGCTATGGGC TCATCGCGCG CGAGGTCGAG CGCGTCGATT CGGGATACCG GTCGATGATG
TCGGTGCAGT CGTCGCTCGT GATGGTGCCG ATCTTCGAAT TCGGCTCCGA CGCGCAGAAG
GAAAAGTACC TGCCGAAGCT CGCGACGGGC GAGTGGATCG GCTGCTTCGG CCTGACCGAG
CCGAACCACG GCTCCGATCC GGGCAGCATG GTCACGCGCG CGAAGAAGGT GCCGGGCGGC
TACGCGCTGT CGGGCTCGAA GATGTGGATC ACGAATTCGC CGATCGCCGA CGTGTTCGTC
GTCTGGGCGA AGCTCGACGA GGACGGGCGC GACGAGATTC GCGGCTTCAT CCTCGAGAAG
GGCTGGAAGG GCCTGTCGGC GCCGGCGATC CACGGCAAGG TGGGCCTGCG CGCGTCGATC
ACGGGCGAGA TCGTGCTCGA CGAAGTGTTC GTCCCCGAAG AGAACATCCT GCCGAACGTA
AAGGGCCTGC GCGGGCCGTT CACGTGCCTG AACTCGGCGC GCTACGGGAT CGCGTGGGGC
GCGCTCGGCG CGGCGGAGTC GTGCTGGCAC ACGGCGCGCC AGTACGTGCT CGATCGCAAG
CAGTTCGGCC GTCCGCTCGC CGCGAACCAG TTGATCCAGA AGAAGCTCGC GGACATGCAG
ACCGAGATCA CGCTCGGCCT GCAGGGCGTG CTGCGGCTCG GCCGGATGAA GGACGAATGC
ACCGCCGCCG TCGAGATCAC GTCGATCATG AAGCGCAATT CGTGCGGCAA GGCGCTCGAC
ATCGCCCGCC TCGCCCGCGA CATGCTGGGC GGCAACGGCA TCTCGGACGA ATTCGGCGTC
GCGCGCCACC TCGTGAACCT CGAAGTGGTG AACACGTACG AAGGCACGCA CGACATCCAC
GCGCTGATCC TCGGCCGCGC GCAAACGGGA ATTCAGGCGT TCTTCTGA
|
|---|
| Protein sequence | MAAATFHWDD PLLLDLQLSD DERIVRDAAN AYAQGKLAPR VTEAFRHETT DAAIFREMGE
VGLLGPTIPE AYGGPGLSYV SYGLIAREVE RVDSGYRSMM SVQSSLVMVP IFEFGSDAQK
EKYLPKLATG EWIGCFGLTE PNHGSDPGSM VTRAKKVPGG YALSGSKMWI TNSPIADVFV
VWAKLDEDGR DEIRGFILEK GWKGLSAPAI HGKVGLRASI TGEIVLDEVF VPEENILPNV
KGLRGPFTCL NSARYGIAWG ALGAAESCWH TARQYVLDRK QFGRPLAANQ LIQKKLADMQ
TEITLGLQGV LRLGRMKDEC TAAVEITSIM KRNSCGKALD IARLARDMLG GNGISDEFGV
ARHLVNLEVV NTYEGTHDIH ALILGRAQTG IQAFF
|
|---|
| |