| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1382 |
|---|
| Symbol | |
|---|
| ID | 3849584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1558343 |
|---|
| End bp | 1559371 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637841054 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_441928 |
|---|
| Protein GI | 83719618 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4966] Tfp pilus assembly protein PilW |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCGAG ATGGCGCGAG CCGGGGCACT GTCGGGCGTC GATTGGGATG CGTCGATGTC
CGGATTGCGC CACGGGAAGC TCGTAGCGAC GGGCTCAGGT GCGGGTATTT CGAGTGTACG
GGTCGAATGG GAGAGGTTGG GGGCGGGCGC CGCGGGGCCG CGGCATTGCG ACGGCGATGT
CACGGCGGCC CAAGATGTCG CGAAGCCGTG CGTGACGCTC GCTTATGCAT CGACGGATCA
CCAATGATGG GAGCAACACG TTGGCGCGCG CACACGCTGA TCGAGGTGAT GATCGCGATG
GCGCTCGGCT TGATGATTTT GCTTGCCGCG ATGACGCTCT ATCGCGTGCA GCGCGCAGCC
TATTCGGCGG CGGCCGATGC CGCGCGCCTG CGCGACGCGG CGCAGGCGGC GCTCGCGCTG
ATCTCGCAAC AGATCCAGTT GGCGGGTTTC GTGCCGCTCG ATGCGCTTGA TGCGCGCTCT
GTGCCGGGGC TGTTCGGCTG CGCTGCGGGG CGCCCCGTCG GCGCCGACGG GCAGCTTGCA
TGCGATTCGC TGGCAAGCGG TTCCGATGGC CTCGTCGTTC GCTATGTGGG AGACGGCGTT
TCCACGTGGC CGACGGCGAG CGGGCGGGCG ACGGACTGTC TCGGCCAAGG TGTCGGCGTG
GCCGACGCGC AGCCGCTGAT CGTCAACCGT TTCTACGCAC GCGTCAGCGC ATCGACGGGC
GAACCTGAAC TTTATTGCGA AGGCAGCGGC AGGCCCGGCA TCGCGCAGCC GCTCGTCGAA
GGTGTCGAGC GCTTGCGTCT GCGCTACCGG TTGCACGGCG CCGCACGGTG GATCGATGCG
CAGGCCTTGT CTGCCGACGA TTGGACCGAT GTGACCGCCG TTTCCGTTTG CGTGCAAGTG
CGGGGCATGC GCACGGGGCG CGCGGCGCGT TACGTCGACT GCGAGGGGCG AGCGGCGAGC
GCGCCGGACA CTCGCGCGAG ACTATCGCTT CGGCGATATG TTGCGGTCCG TAATCGAGCG
GGCGCATGA
|
|---|
| Protein sequence | MVRDGASRGT VGRRLGCVDV RIAPREARSD GLRCGYFECT GRMGEVGGGR RGAAALRRRC
HGGPRCREAV RDARLCIDGS PMMGATRWRA HTLIEVMIAM ALGLMILLAA MTLYRVQRAA
YSAAADAARL RDAAQAALAL ISQQIQLAGF VPLDALDARS VPGLFGCAAG RPVGADGQLA
CDSLASGSDG LVVRYVGDGV STWPTASGRA TDCLGQGVGV ADAQPLIVNR FYARVSASTG
EPELYCEGSG RPGIAQPLVE GVERLRLRYR LHGAARWIDA QALSADDWTD VTAVSVCVQV
RGMRTGRAAR YVDCEGRAAS APDTRARLSL RRYVAVRNRA GA
|
|---|
| |