Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1360 |
Symbol | kdsA-1 |
ID | 3847926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 1538756 |
End bp | 1539601 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637841032 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_441907 |
Protein GI | 83719323 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAG CAATCAGCCC CGGCATCACG GCCGGCAACG ACCGGCCTTT CGTGCTGTTC GGCGGGATCA ACGTGCTCGA GAGTCTCGAC TTCACGCTCG AGGTGTGCAG CGAATACGCC GCGGTGACGC GCAAGCTCGG CATTCCGTTC GTGTTCAAGG CGTCGTTCGA CAAGGCGAAC CGCTCGTCGA TTCATTCGTA TCGCGGCGTC GGGCTCGACG AAGGCCTGAA GATTCTCGCC GAGGTGAAGG CGCGCTTCGG CGTGCCGGTG ATCACCGACG TGCACGAGGT CGAACAGGCC GCACCCGTCG CCGAAGTCGC CGACGTGCTG CAGGTGCCTG CGTTTCTCGC GCGGCAGACC GATCTCGTCG TCGCGATCGC GAAGGCGGCC AAGCCGGTGA ATGTGAAGAA GCCGCAGTTC ATGAGCCCGA CGCAGGTGAA GCACGTGGTG TCCAAATGTC TCGAAGCCGG CAACGATCGC GTGATGCTGT GCGAGCGCGG CAGCTCGTTC GGTTACGACA ATCTCGTCGT CGACATGCTC GGCTTCCGGC AGATGGCCGA GGCGACAGGC GGCTGCCCGG TGATCTTCGA CGTCACGCAC AGCCTGCAAT GCCGCGATCC GCTCGGCGAG GCGTCGGGCG GCCGGCGTCG GCAAGTGCTC GATCTCGCGC GTGCGGGCGT CGCGGTCGGC ATCGCCGGGC TCTTTGTCGA AGCGCATCCC GATCCCGAGC GCGCGCGCTG CGACGGGCCG AGCGCGCTGC CGCTGCCTCT GCTCGAAGGT TTTCTGTCGC AGATGAAGGC GATCGACGAT CTCGTCAAGC GCATGCCGGC GCTCGACATT CGATGA
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Protein sequence | MNVAISPGIT AGNDRPFVLF GGINVLESLD FTLEVCSEYA AVTRKLGIPF VFKASFDKAN RSSIHSYRGV GLDEGLKILA EVKARFGVPV ITDVHEVEQA APVAEVADVL QVPAFLARQT DLVVAIAKAA KPVNVKKPQF MSPTQVKHVV SKCLEAGNDR VMLCERGSSF GYDNLVVDML GFRQMAEATG GCPVIFDVTH SLQCRDPLGE ASGGRRRQVL DLARAGVAVG IAGLFVEAHP DPERARCDGP SALPLPLLEG FLSQMKAIDD LVKRMPALDI R
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