Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1340 |
Symbol | |
ID | 3848938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 1506647 |
End bp | 1508230 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637841012 |
Product | putative capsular polysaccharide biosynthesis protein WcbQ |
Protein accession | YP_441887 |
Protein GI | 83720782 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.684484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATTCT CGGCAGGCTG TCGTATCTGC CGCGCAAGGA GCGCTAGCGT GAGCGGCGGG CTCGCGCTCA TCTTCGCGAT CGCGGCCGCG CTGTCGTTCG CCCTCGATGC GCTTGCGACG CCGCGCGCGC CGTGGCGCAG GCCGATCGCG GCCGCCGCGC TGCACGTGCT CGCGTTCGCG TTCGTCGCGA GCTGCGTGCT GCTCGTCACG GCGCGCGTGC TGTTCTCGGC ATTCGTTGCC GTCGCGCTCG TCGGCCTGAT GGCCGTCGTG AGCAACGCGA AGCACGAATC GCTGCGCGAG CCGTTCGTGT TCACGGATCT GAGCCTCTTC AGCCAGCTGT TCTCGCATCC GCGCCTGTAT CTGCCGTTCC TGAGCGCGGG CAAGGTGGCC GCGATCGCGG CCGGCGTCGC GCTGCTCGCG GCCGGCTACG CGGCCGAGAC GCCGCTCGCG CCGAGGCCGT TCGCTGCGGC GGCCGCCGCG GTTCTCGCGT GCTTCGCCTG CGGTTGCGCG CTCGCGAGAC GCCTCGCGCT CACGCTCGAC GCGAGCGCGG ACCAGCGGCG CCACGGTTTC TTCGCGACGT TCGTCGCCTA TTTGCTGAAC GGGCTGCGGC CCGCGACGCT GCGCGCGTTC GAACGCGCGG CGGCGGCGAG CCCGTTCGCG GACGGCCGGG CCGCCGCGTT TCCCGATGTG ATCGTGATCC AGAGCGAATC GTTTTTCGAT GTGCGGCGTG CGGCCGCAGG CATCGAGCCG TCGCTCTTCG CGCATTTCGA TCGCGCGCGA CGCGAGTCGG CGTTTTACGG CGAGCTTGCG GTGCCCGCGT GGGGCGCCAA CACGATGCGC ACCGAATTCG CGATGCTGAC GGGGCTCGCG TCCGAGCGGC TCGGCTATGC GCGCTTTTAT CCGTACGCGT TCCTGCGCCG CGCGTGCGAT TCGCTTGCCG GCTGGTTCCG GCGCGGCGGC TACCGGACGG TCGCGATCCA TCCGTACTAC GCGGATTTCT TCGGTCGCGA CCGCGTGTTC CCGCTGATGC ATTTCGAGCG TTTCCTCGAC ATCCGCCATT TCGCCGACGC GCCGCGCGCG GGCCCGTACG TCGCCGATGC GGCAGTCGCG GACGCGCTGA TCGCCGAGCT CGACGCGCCG CGCGCGAAGC CGCTCTTCGC GTTCGCGATG ACGATGGAGA ACCACGGCCC GCTGCATCTG GAGGCGGTCG AGCCGGGCGA GTCGCGCGCG CGCCATGCGC TCGGCGACGG CGACGAATGG CGCGATTTGA CGGTTTACTT GCGTCACGTC GCAAATGCAG ATGCAATGAT CGGGCGACTG CTCGAGCATC TGCGCGCTCG ACGGCGCGAC ACGGTCGTGT GTTTCTACGG CGATCATGTC CCGGCGCTGC CGCATGTTTT CGGTAAGCTG GGCGTTGCGC CCGAGCGCAG CGACTACTTC ATCTGGCGGA ATTTCGGCGC GCCGGACGCC CGTCGACGCG ATGCGCGTGT CGAAGAGCTC GGTCTGATCC TGCTTCGCGC GACCGAAGCG CAGGAGGCGA GCAGCCCCGC GGCGAATGCA TCGGAAAAAA CGACACAACG ATGA
|
Protein sequence | MRFSAGCRIC RARSASVSGG LALIFAIAAA LSFALDALAT PRAPWRRPIA AAALHVLAFA FVASCVLLVT ARVLFSAFVA VALVGLMAVV SNAKHESLRE PFVFTDLSLF SQLFSHPRLY LPFLSAGKVA AIAAGVALLA AGYAAETPLA PRPFAAAAAA VLACFACGCA LARRLALTLD ASADQRRHGF FATFVAYLLN GLRPATLRAF ERAAAASPFA DGRAAAFPDV IVIQSESFFD VRRAAAGIEP SLFAHFDRAR RESAFYGELA VPAWGANTMR TEFAMLTGLA SERLGYARFY PYAFLRRACD SLAGWFRRGG YRTVAIHPYY ADFFGRDRVF PLMHFERFLD IRHFADAPRA GPYVADAAVA DALIAELDAP RAKPLFAFAM TMENHGPLHL EAVEPGESRA RHALGDGDEW RDLTVYLRHV ANADAMIGRL LEHLRARRRD TVVCFYGDHV PALPHVFGKL GVAPERSDYF IWRNFGAPDA RRRDARVEEL GLILLRATEA QEASSPAANA SEKTTQR
|
| |