Gene BTH_I1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1278 
Symboltgt 
ID3848421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1427254 
End bp1428438 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID637840950 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_441825 
Protein GI83721101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCG AAGGTCCATC GCACGATACG CCCACGGGCA TTCGCCCGCA TAACGGCCTG 
AAATTCGAAC TGCTGACGAC CGACGGCCGC GCGCGCCGCG GCCGCGTGAC GCTCAATCAC
GGCGTCGTCG AGACGCCGAT CTTCATGCCG GTCGGCACGT ACGGCACCGT GAAGGCCGTG
CAGCCGCGCG AGCTCGACGA GATGCGCGCG CAGATCATCC TCGGCAACAC GTTCCACCTG
TGGCTGCGCC CCGGCCTCGA GACGATCGAC GCGCACGGCG GGCTGCACCG CTTCATGGGC
TGGAACAAGC CGATCCTCAC CGATTCGGGC GGCTTCCAGG TGTTCTCGCT CGGCGATCTG
CGCAAGATCA CCGAGGAAGG CGTCACGTTC GCGTCGCCGA TCAACGGCGA CCGGCTGTTC
CTGTCGCCGG AAGTGTCGAT GCAGATCCAG AAGACGCTGA ATTCCGACAT CGTGATGCAG
TTCGACGAAT GCACGCCGTA CGCGACGAAC GGCGTGCCGA CGACGCACCG GGAAGCGGCC
GAATCGATGC GGATGTCGCT GCGCTGGGCG AAGCGCTCGC TCGCCGAGTT CGAGCGCCTC
GGCAATCCGA ACGCCCTGTT CGGCATCGTG CAGGGCGGCA TGTACGAGGA CCTGCGCGAC
GAATCGCTCG CCGGGCTCTC GGAACTCGGC TTCCACGGCC TCGCGATCGG CGGGCTGTCG
GTCGGCGAGC CGAAGGAGGA CATGATGCGC GTGCTCGAGC ACGTCGCGCC GCGCCTGCCC
GCCGACAAGC CGCACTACCT GATGGGCGTG GGCACGCCGG AGGATCTCGT CGCAGGCGTC
GCGGCGGGCG TCGACATGTT CGACTGCGTG ATGCCGACCC GCAACGCGCG CAACGGCTGG
CTGTTCACGC GCTTCGGCGA CGTGAAGATC CGCAACGCGA CGCACAAGAA TTCGCTCAAG
CCGCTTGACG AGACCTGCGG CTGCTACACG TGCCGACATT TCTCTCGCGG CTACCTGCAC
CATCTGCATC GCGTCGGCGA GATTCTCGGC GCGCAGTTGA ACACGATCCA CAACCTGCAC
TACTACCTCG AGCTGATGCG CGAGATCCGC GAGGCGATCG AGACGCACAC GTTCGAGGCG
TTCCAAAAGC GCTTCGCGCA GGACCGCGCG CGCGGCGTCG ACTGA
 
Protein sequence
MTTEGPSHDT PTGIRPHNGL KFELLTTDGR ARRGRVTLNH GVVETPIFMP VGTYGTVKAV 
QPRELDEMRA QIILGNTFHL WLRPGLETID AHGGLHRFMG WNKPILTDSG GFQVFSLGDL
RKITEEGVTF ASPINGDRLF LSPEVSMQIQ KTLNSDIVMQ FDECTPYATN GVPTTHREAA
ESMRMSLRWA KRSLAEFERL GNPNALFGIV QGGMYEDLRD ESLAGLSELG FHGLAIGGLS
VGEPKEDMMR VLEHVAPRLP ADKPHYLMGV GTPEDLVAGV AAGVDMFDCV MPTRNARNGW
LFTRFGDVKI RNATHKNSLK PLDETCGCYT CRHFSRGYLH HLHRVGEILG AQLNTIHNLH
YYLELMREIR EAIETHTFEA FQKRFAQDRA RGVD