Gene BTH_I1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1227 
Symbol 
ID3847396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1376164 
End bp1376841 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID637840899 
Productglutamate/aspartate ABC transporter, permease protein 
Protein accessionYP_441774 
Protein GI83718860 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAGT TCGACTGGAG TAGTATCCCC GGCTCGCTGC CGACGCTCTG GACGGGCGCG 
ATCGTCACGT TCAAGATCAC GCTGCTCGCG ATCGTGGTCG GGATCGTCTG GGGCACGCTG
CTTGCGCTGA TGCGCCTGTC CGGCGTGAAG CCGCTCGCGT GGTTCGCGCA GGGCTACGTC
ACCGTGTTCC GCTCGATTCC GCTCGTGATG GTGCTGCTGT GGTTCTTCCT GATCGTGCCG
CAGTTGCTGC AGGGCGTGCT CGGGCTGTCG CCGACGATCG ACATCCGGCT CGCGTCGGCG
ATGGTCGCTT TCTCGCTGTT CGAAGCCGCG TATTATTCGG AGATCATCCG GGCGGGCATC
CAGGCGGTAC CGCGCGGGCA GGTGAACGCC GCGTTCGCGC TCGGCATGAA CTATGCGCAG
GCGATGCGCC TCGTGATCCT GCCGCAGGCG TTCCGCGCCA TGGTGCCGCT GCTGCTCACG
CAGGCGATCG TGCTGTTCCA GGATACGTCG CTCGTCTACG TGATCAGCCT CGCGGACTTC
TTCCGCACGG CCGCGAACAT CGGCGATCGC GACGGCACGA GCGTCGAGAT GATCCTGTTC
GCCGGCGCAT GCTATTTCGT CGTGTGCTCG GTCGCATCCG CGTTGGTCAA AGGTCTCCAG
AAAAAGGTCA CAAGATGA
 
Protein sequence
MHQFDWSSIP GSLPTLWTGA IVTFKITLLA IVVGIVWGTL LALMRLSGVK PLAWFAQGYV 
TVFRSIPLVM VLLWFFLIVP QLLQGVLGLS PTIDIRLASA MVAFSLFEAA YYSEIIRAGI
QAVPRGQVNA AFALGMNYAQ AMRLVILPQA FRAMVPLLLT QAIVLFQDTS LVYVISLADF
FRTAANIGDR DGTSVEMILF AGACYFVVCS VASALVKGLQ KKVTR