Gene BTH_I1213 details

Gene Information

• Locus tag: BTH_I1213
• Symbol: holA
• ID: 3848271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 1358974
• End bp: 1360062
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637840885
• Product: DNA polymerase III subunit delta
• Protein accession: YP_441760
• Protein GI: 83719754
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.797197
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACTGC GACTTGACGC GCTGGAGCCG CATCTCTCGA AGGGGCTCGC CGGGCTGTAC 
GTCGTCTACG GTGACGAGCC GCTGCTCGCG CAGGAGGCGT GCGACAAGAT CCGCGCCGCC 
GCGCGCGCGG CGGGCTTCAC CGAGCGCTCG GTGCACACCG TCGAGCGCGG CTTCGACTGG 
AGCACGCTGA TCGGCGCGAG CCAGGCGATG TCGCTGTTCG GCGAGCGGCA GCTCGTCGAG 
CTGCGGATTC CGTCCGGCAA GCCGGGCAAG GATGGCGCCG ACGCATTGAA GACGCTCGCC 
GGCGCGGACA ACCCGGATGC GCTGATGCTC GTCACGCTGC CGCGGCTCGA TTCGGCGACG 
CAGAAGTCCG CGTGGTTCAC GGCGCTCGTG AACGGCGGCG TCGCGCTGAA GGTCGATCCC 
GTCGAGCGCG CGCAGTTGCC GAACTGGATC GGCCAGCGGC TCGCGCTGCA GGGGCAGCGG 
GTCGCGCCGG GCGACGACGG GCGGCGCGCG CTCGCGTTCG TCGCCGAGCG TGTCGAGGGC 
AACCTGCTCG CCGCGCATCA GGAAATCCAG AAGCTCGGCC TGCTGTATCC GGCGGGCACG 
CTGACGTTCG AGCAGATCCA CGACGCGGTG CTGAACGTCG CGCGCTACGA CGTGTTCAAG 
CTCAACGAGG CGATGCTCGC GGGCGACGCC GCGCGGCTTT CGCGGATGAT CGACGGCCTG 
AAGGGCGAGG GCGAGGCGCT CGTGCTCGTG CTGTGGGCGG TCGTCGAGGA GTTGCGCACG 
CTGCTTCGGA TCAAGCGCGG CGTCGCGGCG GGCAAGCCGC TTGCCGTGCT CGTGCGCGAG 
AACCGCGTAT GGGGGGCGCG CGAGCGGCTC GTCGGGCCGG CGCTCGCGCG CGTCTCGGAG 
GCGGCGCTCG AGCACGCGCT CGCGTTCGCC GCGCGGCTCG ACCGGCAGGT CAAGGGGCTT 
TCCGCCGTAT CGCGCGGCGC GGCGCGCGGC GAGCCGCCGC CCGATCCGTG GGACGGCCTG 
TTCCAGCTCG CGATGACCGT CGCGCGCGCG TCCGGGCCGG CCGGCGACGC ACCGCGCCGG 
CCGGCCTGA 

 

Protein sequence

MQLRLDALEP HLSKGLAGLY VVYGDEPLLA QEACDKIRAA ARAAGFTERS VHTVERGFDW 
STLIGASQAM SLFGERQLVE LRIPSGKPGK DGADALKTLA GADNPDALML VTLPRLDSAT 
QKSAWFTALV NGGVALKVDP VERAQLPNWI GQRLALQGQR VAPGDDGRRA LAFVAERVEG 
NLLAAHQEIQ KLGLLYPAGT LTFEQIHDAV LNVARYDVFK LNEAMLAGDA ARLSRMIDGL 
KGEGEALVLV LWAVVEELRT LLRIKRGVAA GKPLAVLVRE NRVWGARERL VGPALARVSE 
AALEHALAFA ARLDRQVKGL SAVSRGAARG EPPPDPWDGL FQLAMTVARA SGPAGDAPRR 
PA