| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1181 |
|---|
| Symbol | araH |
|---|
| ID | 3850097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1327653 |
|---|
| End bp | 1328657 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637840853 |
|---|
| Product | L-arabinose transporter permease protein |
|---|
| Protein accession | YP_441728 |
|---|
| Protein GI | 83720442 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA GAGAGAATCT TCCACAAGCC GCGGCGCATG CGGCGGTCGC GCCGGCCGAG
GGCCGGCAGC GCTGGCGGCA GCACGTCGCC GACTACAGTC TCGTCGCGAT CTTCGCGGCG
ATGTTCGTCG CGATGTCGCT GACGGTCGAT CATTTCTTCT CGATCGACAA CATGCTCGGG
CTCGCGCTGT CGATCTCGCA GATCGGGATG GTCGCGTGCA CGATGATGTT CTGCCTCGCG
TCGCGCGATT TCGACCTGTC GATCGGCTCG ACGGTCGCGT TCGCCGGCGT GCTGTGCGCG
ATGGTGCTCA ACGCGACCGA CAACACGTTC GTCGCGATCG CCGCGGCGGT CGCGGCGGGC
GCGGTCATCG GCTTCGTCAA CGGCGCGGTG ATCGCGTATC TGCGGATCAA CGCGCTGATC
ACGACGCTCG CGATGATGGA GATCGTGCGC GGGCTCGGCT TCATCGTGTC GAAGGGGCAG
GCGGTCGGCG TATCGTCGGA GACGTTCATC GCGCTCGGCG GGCTCACGCT CTTTGGCGTG
TCGCTGCCGA TCTGGGTGAC GCTCGCGTGC TTCGTCGTGT TCGGCGTGCT GCTCAACCAG
ACCGTGTACG GCCGCAACAC GCTCGCGATC GGCGGCAATC CGGAAGCGTC GCGGCTCGCC
GGGATCAATG TCGAGCGCAC GCGCGTCTAC ATCTTCCTGA TCCAGGGCGC GGTGACCGCG
CTCGCGGGCG TGATCCTCGC GTCGCGGATC ACGTCGGGCC AGCCGAACGC CGCACAGGGC
TTCGAGCTGA ACGTGATCTC GGCGTGCGTG CTGGGTGGCG TGTCGCTCGC GGGCGGGCGG
GCGTCGATCT CGGGCGTCGT GATCGGCGTG CTGATCATGG GCACCGTCGA GAACGTGATG
AACCTGCTCA ACATCGATGC GTTCTATCAA TATCTGGTGC GCGGCGCGAT CCTGCTCGCC
GCCGTGCTGC TCGACCAGTT GAAGAATCGC GGCGCGCGCG ATTGA
|
|---|
| Protein sequence | MQARENLPQA AAHAAVAPAE GRQRWRQHVA DYSLVAIFAA MFVAMSLTVD HFFSIDNMLG
LALSISQIGM VACTMMFCLA SRDFDLSIGS TVAFAGVLCA MVLNATDNTF VAIAAAVAAG
AVIGFVNGAV IAYLRINALI TTLAMMEIVR GLGFIVSKGQ AVGVSSETFI ALGGLTLFGV
SLPIWVTLAC FVVFGVLLNQ TVYGRNTLAI GGNPEASRLA GINVERTRVY IFLIQGAVTA
LAGVILASRI TSGQPNAAQG FELNVISACV LGGVSLAGGR ASISGVVIGV LIMGTVENVM
NLLNIDAFYQ YLVRGAILLA AVLLDQLKNR GARD
|
|---|
| |