Gene BTH_I1170 details

Gene Information

• Locus tag: BTH_I1170
• ID: 3848303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 1314928
• End bp: 1316841
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637840842
• Product: ribonuclease II
• Protein accession: YP_441717
• Protein GI: 83721664
• COG category: [K] Transcription
• COG ID: [COG0557] Exoribonuclease R

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCAGG CGGATGAAGC CGCCCAGCAG ATCGATCTGG ACTTTCTGTG GGAGTGCGCG 
CCCGCTGAGG AATTCGCGTA TGCAACGCTC GCCGACGAGT ATTTCGGCGC GAGCTACGGC 
CCCGTCGAGC GCGCGGCGCT CGTGCTGCGC CTGCACGGCG CGCCCGTCTA CTTCCGCCGC 
AAGGGGCGCG GCCAGTATCA GCGCGCGCCC GAGGAGCAGC TGAAAATGGC GCTCGCCGCG 
CTCGAGCGCA AGCGCCAGCA GGCGCTCGTG CAGGCCGGCT ACGAAGAGGA ACTGAAGGCG 
GGCAGGCTGC CCGACGCGTT CGCGGGCAAG GCGCTCGGCC TGCTGACGAG GCCGGACAAG 
AACTCGATCG AATACAAGGC GCTCGATGCG GCGGCGCTCG CGCGCGGCGT GTCGCCCGCG 
CGTCTCCTGC TCGACTGCGG CGGCATTCCG TCGGCGCGCG CGTTGCATGA GGCGCGCTTT 
CTCGCCGAGT ACTTCCCGCA CGGCACGGGC TTTCCGCCCG TCACGGTCGG CAAGCTGCCC 
GACGACCTGC CGCGCGCGGA CGTCGACGCG TTCTCGATCG ACGACGTCAC GACGACCGAG 
ATCGACGACG CGTTCTCCGT CGAGCATCTG TCCGATGGGC GCGTGCGCAT CGGCGTGCAC 
ATCGCGGCGC CCGCGCTCGG CGTCGTGCGC GGCGACGCGG TGGATGCGAT CGCGCGCGCG 
CGGCTGTCGA CCGTCTACAT GCCGGGCGAC AAGATCACGA TGCTGCCGGA CGACGTGGTC 
GACGTGTTCA CGCTGAAGGA GGGCGGCTAC CGCCCGGCGC TGTCGCTGTA CATCATCGTG 
AAGCGCGACA CGCAGGAGAT CGTCGCGAAC GAGACGCGGG CCGAATTCGT CTATGTGAAG 
AGCAACCTGC GGCACAACAC GCTCGACGGG CTCGTCACGG AAGACGCGCT CGCGGCGGGC 
ACGGGCGACT ATCCGCACAA GGACGATATC GCGGTGCTCT GGCCGCTCGC GCAGGCGCTC 
TTCGAGCGGC GCCAGGTCGC GCGCGCGGGC TACGGGCTCA AACGCGAAGT GCAGCGCAAT 
ACCGATTACA ACTTCTATGT CGAAGGCGAG CGCGTGTCGA TCACGCCGCG CCGGCGCGGG 
TCGCCGCTCG ATCTGATCGT GTCGGAACTC GCGATTCTCG CGAACTCGAC GTGGGGCGCG 
TTCCTGCACG ATCACAGCGT GCCCGGCATC TATCGCACGC AGCGCGCGTT CGGCATGCCG 
AGCGGGCCGA AGCGCACGCG GATGCAGACG AGCGCTGCGC CGCACGAGGG GCTCGGCGTG 
CCGCAGTATG CGTGGAGCAC GTCGCCGCTG CGCCGTTACG TCGACCTCGT CAATCAGTGG 
CAACTGCTCG CGTGCGTGCA GCACGGCGTG ACCGCGAAGC TCGCCGCGCC GTTCAAGCAG 
AAGGACGCGG ATCTGTACGC GGTCGTGCAG GGTTTCGACG ACACGTACGC CGCATACGCC 
GACCACCAGC GCCGGATGGA GTATTTCTGG TGCCTGCGCT GGATCAAGCA GGAAGGCCGC 
AAGCAGGTGA GCGCGACCGT CGTGAAGGGC GAGCTCGTGC GCCTCGACGA CGTGCCGCTG 
CTGCTGCACG TGCCCGCGCT CGGCGTGCAT GCGCGCGGCA CGCGGGTGCT GCTCGATGTG 
ATGTCGGTCG ACGAATTGAC GATCGAGGCG TCGGTGCGGC TTCTCAGCGT GCTCGATGCG 
CCGACGGTGT CGGGCGGCGA GCCGTCGGAC GATGAAGAGG ACGCCGGCGC GGCCGACGAC 
GTGCTGCTCG ACGCCGCCGA CGAATCGGCG GAAAGCGAAG CGGAAGCGCT CGCCGAGGCG 
AGCGGCGGCG GCAATGGCGA ATCGCCGGCG AACGGCGAGG AACAGTCGAA ATGA 

 

Protein sequence

MQQADEAAQQ IDLDFLWECA PAEEFAYATL ADEYFGASYG PVERAALVLR LHGAPVYFRR 
KGRGQYQRAP EEQLKMALAA LERKRQQALV QAGYEEELKA GRLPDAFAGK ALGLLTRPDK 
NSIEYKALDA AALARGVSPA RLLLDCGGIP SARALHEARF LAEYFPHGTG FPPVTVGKLP 
DDLPRADVDA FSIDDVTTTE IDDAFSVEHL SDGRVRIGVH IAAPALGVVR GDAVDAIARA 
RLSTVYMPGD KITMLPDDVV DVFTLKEGGY RPALSLYIIV KRDTQEIVAN ETRAEFVYVK 
SNLRHNTLDG LVTEDALAAG TGDYPHKDDI AVLWPLAQAL FERRQVARAG YGLKREVQRN 
TDYNFYVEGE RVSITPRRRG SPLDLIVSEL AILANSTWGA FLHDHSVPGI YRTQRAFGMP 
SGPKRTRMQT SAAPHEGLGV PQYAWSTSPL RRYVDLVNQW QLLACVQHGV TAKLAAPFKQ 
KDADLYAVVQ GFDDTYAAYA DHQRRMEYFW CLRWIKQEGR KQVSATVVKG ELVRLDDVPL 
LLHVPALGVH ARGTRVLLDV MSVDELTIEA SVRLLSVLDA PTVSGGEPSD DEEDAGAADD 
VLLDAADESA ESEAEALAEA SGGGNGESPA NGEEQSK