Gene BTH_I1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1048 
Symbol 
ID3847318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand+ 
Start bp1189623 
End bp1190273 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID637840720 
Productphosphatidylserine decarboxylase 
Protein accessionYP_441602 
Protein GI83718782 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0122315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATC CTCATCCGAT CATCGCGCGC GAAGGCTGGC CGTTCATCGC GATCGCGGCT 
GTCGTCGCGC TGTTGATCCA TGCCGTCGGC GGATTCGGCC TCGCATGGCC GTTCTGGCTG 
CTGCTCGTCT TCGTGGTCCA GTTCTTCCGC GATCCGCCGC GTGCGATTCC GACGCAGGCG 
AACGCGGTGC TGTGCCCGGC CGACGGCCGC ATCGTCGCGG TCGAAACGGC GCACGATCCG 
TATGCGAATC GCGAAGCGCT GAAGATCAGC GTGTTCATGA ACGTGTTCAA CGTGCACTCG 
CAGCGCTCGC CCGTCGACGG CGCGGTGCAG AAGGTCGAGT ATTTCCCGGG CGCGTTCCTG 
AACGCCGCCC TCGACAAGGC GTCGGCCGAG AACGAGCGCA ACGCGGTCGT GATCCAGACG 
GGTTCGGGCC ACACCGTGAC GGCCGTGCAG ATCGCGGGCC TCGTCGCGCG CCGGATTCTC 
TGCTACGTGC GCGCGGGCGA GCCGCTGTCG CGCGGCCAGC GCTATGGTTT CATCCGCTTC 
GGCTCGCGTG TCGACGTGTA TCTGCCGAAG GGCAGCCGTG CCCGCGTGTC GATCGGCGAG 
AAGGTGTCCG CATCGTCGAC GATCCTCGCC GAGCTGCCCG AACAACAGTA A
 
Protein sequence
MNYPHPIIAR EGWPFIAIAA VVALLIHAVG GFGLAWPFWL LLVFVVQFFR DPPRAIPTQA 
NAVLCPADGR IVAVETAHDP YANREALKIS VFMNVFNVHS QRSPVDGAVQ KVEYFPGAFL 
NAALDKASAE NERNAVVIQT GSGHTVTAVQ IAGLVARRIL CYVRAGEPLS RGQRYGFIRF 
GSRVDVYLPK GSRARVSIGE KVSASSTILA ELPEQQ