Gene BTH_I0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0981 
Symbol 
ID3847999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1113094 
End bp1114809 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content69% 
IMG OID637840653 
ProductATP-dependent RNA helicase RhlE 
Protein accessionYP_441535 
Protein GI83720702 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGCA TCGGCGGCCG GGCCGAGCCG ATCGCCGATG CCTGCCCGCC GACCGAGCCG 
ATTCGCGAGG GATGCTACAA TAACGCCCTT TCTGCCGGCG CTCCTGCCGG ACGAAGCCTC
GCGCGCGGCC CGGATGGCCT CAAGCGCCGG CGGCGCCCTG CGGCGCGCCG CGGCTTCGTG
TTCATTCCGA AGTGGGTTGC GTCGCCTGTC TCGCGAGCGA GCAGGTCGTG CGCTGGATGT
CCCGCCGCGC CTTTTGAGCG AAACGCCACC ATGTCCGATT CTGTTGCCAA GCCTGTCGAC
GCGACGTTCG ATCAATTCGG CCTTGCCGCC GAGATCCTGA GAGCGATTGC CGAGCAGGGC
TATACGACGC CGACGCCGAT CCAGGCGAAC GCGATTCCGG TCGTGCTGTC CGGCCGCGAC
GTGATGGGCG CCGCGCAGAC CGGCACCGGC AAGACCGCGA GCTTCTCGCT GCCGATCATC
CAGCGGCTGC TGCCGCAGGC GAACACGAGC GCGTCGCCGG CGCGCCACCC GGTGCGCGCG
CTGATTCTCA CGCCGACCCG CGAGCTTGCC GACCAGGTCG CCGCGAACGT GCATGCGTAT
GCGAAGCACA CGCCGCTGCG CAGCGCCGTC GTGTTCGGCG GCGTCGACAT GAACCCGCAG
ATGGCCGAAC TGCGTCGCGG CGTCGAGATC CTGATCGCGA CGCCCGGGCG CCTGCTCGAC
CACGTTCAGC AGAAGACCGC GAATCTCGGC CAGGTGCAGA TCCTCGTGCT CGACGAGGCG
GACCGGATGC TCGACATGGG TTTCCTGCCC GATCTGCAGC GAATTCTGAA CCTGCTGCCG
AAAGAGCGTC AGACGCTGCT TTTCTCGGCG ACGTTCTCGC CCGAGATCAA GAAGCTCGCG
TCGACCTACC TGCGCAATCC GCAGACGATC GAGGTCGCGC GCAGCAACGC GGCCGCGTCG
ACCGTCACGC AGATCGTCTA CGACGTCGCC GAAGGCGACA AGCAGGCGGC CGTCGTCAAG
CTGATCCGCG ATCGCTCGCT CAAGCAGGTG ATCGTGTTCT GCAACAGCAA GATCGGCGCG
AGCCGCCTCG CGCGCCAGAT CGAGCGCGAC GGCATCGTCG CGGCCGCGAT TCACGGGGAC
CGTTCGCAGA GCGAGCGGAT GCAGGCGCTC GACGCGTTCA AGCGCGGCGA GATCGAAGCG
CTCGTCGCGA CCGACGTCGC CGCGCGCGGC CTCGACATCG CCGAACTGCC GGCCGTCATC
AACTTCGATC TGCCGTTCAA TGCGGAAGAC TATGTGCACC GGATCGGCCG CACCGGGCGC
GCGGGCGCGT CGGGCGACGC GCTGTCGCTG TGCAGCCCGA ACGAGCGCAA GCAACTCGCC
GACATCGAGA AGCTGATCAA GCGGACACTG TCGCTCGAAA CGCTCGAGCT CGACCTGCCG
CGCCATCGCC ACGACGAGCG CGGCGGCCGC CGCGAACGCG AGCGCGACGA GCGCCGCGGC
GCATCGGCCG GCCGCCGCTC GGCGGGCGGC GAGCGCGCGC ATCATCCGCG CCGCGAAGCG
CCGATCGACG ATTTCTTCCT GAAGCCGTAC GTGCCGTCGT CGTCCGCTAA CCAGCCGGAA
GAGGCGAAGC CGGCGCAGCC GGAGAAAAAG GCGCCGAAGC AGCCGCTCGC CGCGCTGCTG
GGCGGCTTCG GGATGCCGCG CAAGACGTCG TCTTGA
 
Protein sequence
MARIGGRAEP IADACPPTEP IREGCYNNAL SAGAPAGRSL ARGPDGLKRR RRPAARRGFV 
FIPKWVASPV SRASRSCAGC PAAPFERNAT MSDSVAKPVD ATFDQFGLAA EILRAIAEQG
YTTPTPIQAN AIPVVLSGRD VMGAAQTGTG KTASFSLPII QRLLPQANTS ASPARHPVRA
LILTPTRELA DQVAANVHAY AKHTPLRSAV VFGGVDMNPQ MAELRRGVEI LIATPGRLLD
HVQQKTANLG QVQILVLDEA DRMLDMGFLP DLQRILNLLP KERQTLLFSA TFSPEIKKLA
STYLRNPQTI EVARSNAAAS TVTQIVYDVA EGDKQAAVVK LIRDRSLKQV IVFCNSKIGA
SRLARQIERD GIVAAAIHGD RSQSERMQAL DAFKRGEIEA LVATDVAARG LDIAELPAVI
NFDLPFNAED YVHRIGRTGR AGASGDALSL CSPNERKQLA DIEKLIKRTL SLETLELDLP
RHRHDERGGR RERERDERRG ASAGRRSAGG ERAHHPRREA PIDDFFLKPY VPSSSANQPE
EAKPAQPEKK APKQPLAALL GGFGMPRKTS S