| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0948 |
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| Symbol | |
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| ID | 3849923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 1072452 |
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| End bp | 1074812 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637840620 |
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| Product | EAL/GGDEF domain-containing protein |
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| Protein accession | YP_441502 |
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| Protein GI | 83719449 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.239012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCGT CTCGGTCACA CGCCGCCCGC GCCGCGCGGC CGGTGCGCGC GACACGCAAG
TCGCGCCGCC GGCGCGCGCT GTTCGCGATC CCGCTCCTCG GCACGCTGGC GCTCGCGCTG
CTGTGGGTGG CCATCATCGC GCGCCTGTCC GTCGAGAAGG AAAGCGCGTT CCGCGACGCG
GGCGCGTCGG CCGCGATCCT GTCGACGGCG CTCGAGCAGC ACACGGTCAA GGCGATCCAT
CAGGTCGACC AGATCACCCG CTTCGTCAAA TACGAATTCG AGAAGTCGCC CGCCCGCTTC
AATCTCGCGC GCACGGTCGA GAAAGGCGTC GTGCCGAGCG ACACGCTGAT CCAGGTGTCC
ATTCTCGATG CGCGCGGCCG GCTGATCGCG AACACCGCCG AGTTGCATCC GAAGCCGATC
GACCTGTCCG ACCGCGAGCA CTTCAGGGTG CACATGCAGC GCAACGACGA CGATCTCTAC
ATCAGCAAGC CGGTGTTCGG CCGCGTGTCG CGCCACTGGA CGCTGCAGAT GACGCGGCGC
CTGAACCATC CGGACGGCTC GTTCGCCGGC GTCGTCGTCG TGTCCGAGGA CCCGACCTAC
TTCACGAACG ACTTCTACAA CAACGCGACG CTCGGCAAGG ACGGCGTGAT CGCCGTGATC
TCGGATACCG GCGCCGTGCT CGCGCGCAGC ACGGGCTCCA CGCAGAAGTC GCCCGGCACG
TTCTCGGCGT CGGGCGTCTA TCCAGTGTCG GAGCGCGCGT CGGGCATCTA TGTCGATCCG
ATCGACGGCA TCAGGCGCAT CGTGTCGTAT CGCCATCTCG ACGGCTATCC GCTCGGCGTG
ATGGTCGGCC TGTCGCAGGC GGAAGAATTC GCCGACTATC ACCACACGCG CAACGTCTAC
CTGCTGATGA CGAGCTTCAT CACGCTCGCG ATGCTCGCGT TCTTCGGCGT CGCGACGGGC
CTGATCGGCA AGCTGCTCGG CCGCGAGCGC GAAATGACGC AGCTCGCCGA GTTCGATCTG
CTCACGGGGC TCGCGAACCG CTACGCGACG CTGCGCAGCC TGCGCAACGA CGTCGCGCTG
CCGTCGAACC TGTCGCGCCT CGCGATCCTG TTCATCGATC TCGACAATTT CAAGACCGTC
AACGACACGC TCGGCCACAA CGCGGGCGAC ATCGTGCTGC AGATGACGGC CGCGCGCCTG
TCCGACGCGG TGACGAACGA AGGCGCGCTC GCGCGCATCG GCGGCGACGA GTTCGTCGTC
GTCGTGAAGG GCGAGAACGT CGAGCGGCGC GCCGAGCGCC TCGCCGAGGC GATCGTGCGG
ATGTTCGCCG AGCCGTTCGA CGTGCGCGGC AGCTCGTTCG TGCTGCACGC GAGCATCGGC
ATCGCGCTGC ATTCGGTCGA GAACGAGAGC GAGATCGACC TGCTGAAGAA GGCCGATCTC
GCGATGTACA GCGCCAAGGA CGCGGGCAAG AACTGCTACC AGTTCTATGC GCCGCACCTG
TCGCATCGCG CCGATCACCT GATGCGCTGG GAGCAGCAGT TGCGCGTCGC GCTGTCGGAC
GGGCAATTGT TCCTCGCCTA CCAGCCGAAG ATCGATCTCA CGTACCGCTG CATCACCGGC
TTCGAGGCGC TCGTGCGCTG GGACCATCCG GAGCACGGCG TGATCTCCGC GAACGAATTC
ATTTCGATCG CCGAATCGAC CGGGCTCATC GTTCCGATCG GAGACTTCGT GATCCGCACC
GCGTGCGAGC AGCTCGCGCG CTGGCGCGAC GAAGGCCACG ACAAGCTCAC GCTCGCCGTC
AACATCTCGC CCGTGCAGTT CTGGCGCGGC GACCTGATCG ACACGATCTC GCGCGCGCTC
GTCGAGACCG GGATCGAGGC GCGCCGCCTC GAGCTCGAGA TCACCGAGAC CGCGATGATG
GAATACCCTG AGCTCGTGTC GGAGAAGATC GTCGCGCTGA AGAAGCTCGG TATCCGCGTC
GCGCTCGACG ATTTCGGCAC CGGCTATTCG TCGCTGTCCT ATCTGCACCG CTTCTCGGTC
GATACGCTGA AGGTCGACCG GTCGTTCATC CAAGCGATTC CGGCCGACCG CAGCGTGTGC
GTGATGGTGT CGTCGATCGT GCACCTAGCG CGCTCGCTCG GGCTCACGGT CGTCGTCGAG
GGGACGGAGA CCGAAGAGCA GATCGCGTGG CTCGCCGCGC TCGGGCGCAT CGAGGCCCAA
GGCTTCCTGT TCTCGCGGCC GGTGCCCTCC GACGGCATTC CGGCCCTGCT CGCGCGCTTC
GGCGTCTGCG GCGGCGACCG CGCGTCCATG GCCCGCCGCG ACGCCGCGAG CCCCGCCAAA
CAGTCGTTCG GCAGCGACTA A
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| Protein sequence | MSSSRSHAAR AARPVRATRK SRRRRALFAI PLLGTLALAL LWVAIIARLS VEKESAFRDA
GASAAILSTA LEQHTVKAIH QVDQITRFVK YEFEKSPARF NLARTVEKGV VPSDTLIQVS
ILDARGRLIA NTAELHPKPI DLSDREHFRV HMQRNDDDLY ISKPVFGRVS RHWTLQMTRR
LNHPDGSFAG VVVVSEDPTY FTNDFYNNAT LGKDGVIAVI SDTGAVLARS TGSTQKSPGT
FSASGVYPVS ERASGIYVDP IDGIRRIVSY RHLDGYPLGV MVGLSQAEEF ADYHHTRNVY
LLMTSFITLA MLAFFGVATG LIGKLLGRER EMTQLAEFDL LTGLANRYAT LRSLRNDVAL
PSNLSRLAIL FIDLDNFKTV NDTLGHNAGD IVLQMTAARL SDAVTNEGAL ARIGGDEFVV
VVKGENVERR AERLAEAIVR MFAEPFDVRG SSFVLHASIG IALHSVENES EIDLLKKADL
AMYSAKDAGK NCYQFYAPHL SHRADHLMRW EQQLRVALSD GQLFLAYQPK IDLTYRCITG
FEALVRWDHP EHGVISANEF ISIAESTGLI VPIGDFVIRT ACEQLARWRD EGHDKLTLAV
NISPVQFWRG DLIDTISRAL VETGIEARRL ELEITETAMM EYPELVSEKI VALKKLGIRV
ALDDFGTGYS SLSYLHRFSV DTLKVDRSFI QAIPADRSVC VMVSSIVHLA RSLGLTVVVE
GTETEEQIAW LAALGRIEAQ GFLFSRPVPS DGIPALLARF GVCGGDRASM ARRDAASPAK
QSFGSD
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