Gene BTH_I0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0888 
Symbol 
ID3849221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1014448 
End bp1015161 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID637840561 
Productamino acid ABC transporter, permease protein 
Protein accessionYP_441444 
Protein GI83721356 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAC TGATCCAAGA ATACTGGCGC AATTACCTGT ATACGGACGG GTATCGCTTC 
ACCGGCCTCG CGATCACGCT GTGGCTGCTC GTCGTGTCGA TCGGGATCGG CTTCTGTCTT
TCGGTGCCGC TCGCGGTCGC GCGCGTGTCG AAGAAGAAAT GGCTCGCGGG CGCCGTCTGG
CTCTATACGT ACGTGTTCCG CGGCACGCCG CTCTACGTGC AGCTGCTCCT CTGCTACACG
GGCCTCTATA GCCTGCAGGC CGTGCGCGGC ACGCCGATGC TCGACGCGTT CTTCCGCGAC
GGGATGAACT GCACGCTGCT CGCGTTCACG CTGAACACCT GCGCGTACAC GACCGAGATC
TTCGCGGGCG CGATCAAGTC GACGTCGTAC GGCGAGATCG AGGCGGCCCG GGCTTACGGG
ATGTCGACCT TCACGCTGTA TCGCCGGATC GTGCTGCCGT CGGCGCTGCG CCGCGCGCTG
CCGCTCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGGTCGC GTTCACGGCG
ACCGTGCCCG ATATCCTGAA GATCGCGCGC GACGTCAATT CGGCGACCTA CATGTCGTTC
CATGCGTTCG GCATCGCCGC CCTCCTCTAT CTCGCGATCT CGTTTACGCT CGTGTGGCTG
TTCCGCCGCG CCGAGCGCCG CTGGCTCGCG TATCTGCGCC CGCAAGGCAA ATGA
 
Protein sequence
MIELIQEYWR NYLYTDGYRF TGLAITLWLL VVSIGIGFCL SVPLAVARVS KKKWLAGAVW 
LYTYVFRGTP LYVQLLLCYT GLYSLQAVRG TPMLDAFFRD GMNCTLLAFT LNTCAYTTEI
FAGAIKSTSY GEIEAARAYG MSTFTLYRRI VLPSALRRAL PLYSNEVILM LHATTVAFTA
TVPDILKIAR DVNSATYMSF HAFGIAALLY LAISFTLVWL FRRAERRWLA YLRPQGK