| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0759 |
|---|
| Symbol | icd |
|---|
| ID | 3849109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 873208 |
|---|
| End bp | 874467 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637840432 |
|---|
| Product | isocitrate dehydrogenase |
|---|
| Protein accession | YP_441315 |
|---|
| Protein GI | 83721398 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0538] Isocitrate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00264456 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATC AGCACATCAA GGTTCCGGAA GGCGGTGACA AGATCACCGT CAACAAGGAT
TTCTCGCTCA ACGTTTCCGA TCAGCCGATC ATTCCCTACA TCGAGGGCGA CGGCACGGGC
TTCGATATCA CGCCGGTGAT GATCAAGGTC GTCGACGCGG CGGTCGAGAA GGCGTACGGC
GGCAAGAAGA AGATCCACTG GATGGAGATC TACGCCGGCG AGAAGGCGAC GAAGGTCTAC
GGTCCGGACG TGTGGCTGCC GGAAGAGACG CTGCAGGTGC TGAAGGAGTA CGTCGTGTCG
ATCAAGGGGC CGCTCACGAC CCCGGTCGGC GGCGGCATCC GTTCGCTGAA CGTCGCGCTG
CGCCAGGAGC TCGACCTGTA CGTCTGCCTG CGCCCGATTC AGTACTTCAA GGGCGTTCCC
TCGCCCGTGC GCGAGCCGGA GAAGACCAAC ATGGTGATCT TCCGCGAGAA CTCGGAAGAC
ATCTACGCCG GCATCGAATG GGCGGCCGAA TCCGAGCAGG CGAAGAAGGT CATCAAGTTC
CTGCAGGAAG AGATGGGCGT GAAGAAGATC CGCTTCCCGG AAACGTCGGG CATCGGCATC
AAGCCCGTGT CGAAGGAAGG CACCGAGCGC CTCGTGCGCA AGGCGATCCA GTACGCGATC
GACAACGACC GCAAGTCGGT CACGCTCGTC CACAAGGGCA ACATCATGAA GTTCACGGAA
GGCACGTTCC GTGACGCCGG CTATGCGCTC GCCCAGAAGG AGTTCGGCGC GGTGCTGATC
GACGGCGGCC CGTGGATGAA GTTCAAGAAC CCGAAGACGG GCAACGAGAT CGTGATCAAG
GATTCGATCG CCGATGCGTT CCTGCAGCAG ATCCTGCTGC GCCCGGCCGA GTACGACGTG
ATCGCGACGC TGAACCTGAA CGGCGACTAC ATCTCGGACG CGCTTGCCGC GCAAGTCGGC
GGCATCGGCA TCGCGCCGGG CGCGAACCTG TCGGATTCGG TCGCGATGTT CGAAGCGACG
CACGGCACGG CGCCGAAGTA CGCAGGCAAG GACTACGTGA ACCCGGGTTC GGAAATCCTG
TCCGCCGAAA TGATGCTGCG CCACCTCGGC TGGACCGAAG CGGCCGACGT CATCATCGCC
GCGATGGAAA AGTCGATCAA GCAGAAGCGC GTCACGTACG ACTTCGCGCG CCTGATGGAA
GGCGCGACGC AAGTGTCGTG CTCGGGCTTC GGTCAGGTGC TGATCGAAAA CATGCAGTAA
|
|---|
| Protein sequence | MPYQHIKVPE GGDKITVNKD FSLNVSDQPI IPYIEGDGTG FDITPVMIKV VDAAVEKAYG
GKKKIHWMEI YAGEKATKVY GPDVWLPEET LQVLKEYVVS IKGPLTTPVG GGIRSLNVAL
RQELDLYVCL RPIQYFKGVP SPVREPEKTN MVIFRENSED IYAGIEWAAE SEQAKKVIKF
LQEEMGVKKI RFPETSGIGI KPVSKEGTER LVRKAIQYAI DNDRKSVTLV HKGNIMKFTE
GTFRDAGYAL AQKEFGAVLI DGGPWMKFKN PKTGNEIVIK DSIADAFLQQ ILLRPAEYDV
IATLNLNGDY ISDALAAQVG GIGIAPGANL SDSVAMFEAT HGTAPKYAGK DYVNPGSEIL
SAEMMLRHLG WTEAADVIIA AMEKSIKQKR VTYDFARLME GATQVSCSGF GQVLIENMQ
|
|---|
| |