| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0682 |
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| Symbol | |
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| ID | 3849873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 784246 |
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| End bp | 785805 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637840355 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_441238 |
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| Protein GI | 83718989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.323921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAA AACATGCTTT GACTGCACTC GCAGTCGCGC TGCTCGCCGC GGGCTGCACG
CTCGCGCCGC GCTACGAGCG TCCGGCCGCG CCCGTGTCGG GCGCGTTCCC GACCGACGGC
GTCTACGCCG CGCAGCCGGG CGCCGCGGCC GGCGCGCGCA GCGCGAACGG CCAGGCGGCC
GTCGACATCG GCTGGCGCGA GTTCTTCGTC GATCCGCGCC TGCAGCGGCT GATCGAGATC
GCGCTGAAGA ACAACCGCGA TCTGCGCGTG TCGGTGCTCA ACGTCGAGGC GTCGCGCGCG
CAGTATCGGA TCACGCGCGC GGGCCTGTTC CCGACGCTCG ACGGCACCGG CACGGGCACG
ATCCAGCGCA CGCCGGCCGG TGTGTCGGTA ACCGGCCAGC CGCTCATCTC GCGGACCTAC
AATGTCGGCG TGTCCGCGTC GTGGGAGCTC GACCTGTTCG GCCGCGTGCA GAGCCTGAAG
GATCAGGCGC TCGCGCAATA CTTCGCGACC GCGCAGGCGC GCAAGGCCGC GGAGATCTCG
CTCGTCGCGA GCGTCGCCGA TCAGTATCTG ACGCTGCTGT CGACCGACGA TCTGCTGCAG
ATCACGGAGA ACACGCTGAA GACGGCGCGC GCGTCGTACG ACCTGACGAA GCTGCAGTTC
GACAACGGCA CCGGCTCGGA GCTCGATCTG CGGCAGGCGC AGACGGTCGT CGAGACCGCG
CTCGCGAACC AGCAGGCGCA GGCGCGCGCC CGCGCGCAGG CGGTCAACGC GCTCGTGCTG
CTGATCGGCG AGCCGCTGCC CGACGATCTG CCGGCCGGCC TGCCGCTCAA TGCGCAGAAT
CTGCTGACCG ACATCCCGGC CGGGCTGCCG TCCGATCTGC TGACGCGCCG CCCCGACATC
ATGCAGGCCG AGGAGACGCT GCGCGCGGCG AACGCGAACA TCGGCGCGGC GCGTGCGGCG
TTCTTCCCGA AAATCTCGCT CACCGGCGCG TTCGGCACCG CGAGCCCGAC GCTCGGCGGC
CTGTTCAAGG CGGGCACGGC GGCGTGGTCG TTCGCGCCGA GCATCGCGCT GCCGATCTTC
GAGGGCGGAC AGAACATCGC CAATCTCGAT CTCGCGCACG TGCAGAAGCG CATCGAGATC
GCGAACTACG AGAAGGCGAT CCAGAGCGCG TTCCGCGAGG TGTCGGACGG GCTTGCCGCG
CGCGGCACGT ACGATCAGCA GATCGCGGCG CTCGAGCGCA ACGAGCACGC GCAGCAGCGC
CGCTACGATC TGTCGGACCT GCGCTACAAG AACGGCGTCG ACAGTTATCT GTCGGTGCTG
ACCGCGCAGA CGGATCTGTA TTCGGCGCAG CAGCAACTGA TCAGCGCGCG GCTCGCGCGC
TGGACGAACC TCGTCGATCT GTATCGCGCG CTGGGCGGCG GCTGGATCGA ACGCGCGGGC
GAGACGCCGC GCCCGGCGGA TGCGCCTGTC GACTACGGCA AGGCGGCAGC GCCTGCGCCG
GCGTCGGCGT CGGCGTCGGC GGCGCCCGCT GCGGCGGCCA GCGCGCCGGC GGCCGGCTGA
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| Protein sequence | MKRKHALTAL AVALLAAGCT LAPRYERPAA PVSGAFPTDG VYAAQPGAAA GARSANGQAA
VDIGWREFFV DPRLQRLIEI ALKNNRDLRV SVLNVEASRA QYRITRAGLF PTLDGTGTGT
IQRTPAGVSV TGQPLISRTY NVGVSASWEL DLFGRVQSLK DQALAQYFAT AQARKAAEIS
LVASVADQYL TLLSTDDLLQ ITENTLKTAR ASYDLTKLQF DNGTGSELDL RQAQTVVETA
LANQQAQARA RAQAVNALVL LIGEPLPDDL PAGLPLNAQN LLTDIPAGLP SDLLTRRPDI
MQAEETLRAA NANIGAARAA FFPKISLTGA FGTASPTLGG LFKAGTAAWS FAPSIALPIF
EGGQNIANLD LAHVQKRIEI ANYEKAIQSA FREVSDGLAA RGTYDQQIAA LERNEHAQQR
RYDLSDLRYK NGVDSYLSVL TAQTDLYSAQ QQLISARLAR WTNLVDLYRA LGGGWIERAG
ETPRPADAPV DYGKAAAPAP ASASASAAPA AAASAPAAG
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