Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0680 |
Symbol | |
ID | 3848132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 779764 |
End bp | 781026 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637840353 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_441236 |
Protein GI | 83720836 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.557778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGTCG CGACGGCTGC CGTTTTTCTG GCCGCGTGCG GAAAAAAAGA ATCGGCTCCG CCCCCTCAAA CGCCCGAAGT CGGCGTCGTC ACCGTCCAGC CGCAAGCCGT GCCGGTCGTC TCCGAATTGC CGGGCCGCAC GAGCGCGTAT CTGGTCGCGC AGGTGCGCGC GCGGGTGGAC GGCATCGTGT TGCGGCGTGA GTTCACGGAA GGCAGCGACG TCAAGGCCGG CCAGCGTCTG TACAAGATCG ATCCCGCCCC GTACATCGCG CAGTTGAACA GCGCGAAGGC GACGCTCGCG AAGGCGCAGG CGAATCTCGC GACGCAGAAC GCGCTCGTCG CGCGCTACAA GGTGCTCGTC GCCGCGAACG CGGTCAGCAA GCAGGACTAC GACAACGCGG TGGCCACGCA AGGGCAGGCC GCCGCCGACG TGGCGGCCGG CAAGGCCGCG GTCGACACCG CGCAGATCAA CCTCGGCTAT ACGGACGTGG TCTCGCCGAT CACGGGCCGC GTCGGCATCT CGCAGGTCAC GCCGGGCGCG TACGTGCAGG CGAGCCAGGC GACGCTGATG TCGACCGTCC AGCAGCTCGA TCCCGTCTAC GTCGACCTCA CGCAGTCGAG CCTCGACGGC CTGAAGCTGC GCCAGGACAT CCAGAGCGGG CGCATCAAGA CGGAGGGTCC GGGCGCGGCG AAGGTCACGC TGATCCTCGA GGACGGCAAG GCGTACTCGG AGCCGGGCAA GCTGCAGTTC AGCGACGTCA CGGTCGACCA GACGACGGGC TCGGTCACGA TTCGCGCGAT CTTCCCCAAC AAGCAGCGCG TGCTGCTGCC GGGCATGTTC GTGCGCGCGC GCATCGAAGA GGGCGTCAAC GACAACGCGT TCCTCGTCCC GCAGATCGGC GTCACGCGCG ATCCGAAGGG CCAGGCGGTC GCGATGATCG TCGACGGCAA GGGCAAGGTC GAGCCGCGCG TGCTCACGAC GAGCGGCACG CAGGGCCAGA ACTGGGTCGT CGAAGGCGGC CTGCAGGCGG GCGACCGCGT GATCGTGCAG GGCATCGACA AGGTGCGCCC GGGCATGACC GTGAAGACCG CCGAAGCTCA ATTGCCGGCC GCGGCGTCCG GCGCGTCCGG CGCCGCGCCC GCGGGCGGCT CGCCCGCCCA GGCCGCGGCG GCGAGCGCGG CCGCATCGGG TGCCGCGCCG TCGAGCGCTG CCGCCGCGTC GAGCGCGAAA TAA
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Protein sequence | MRVERVPYRL ITVATAAVFL AACGKKESAP PPQTPEVGVV TVQPQAVPVV SELPGRTSAY LVAQVRARVD GIVLRREFTE GSDVKAGQRL YKIDPAPYIA QLNSAKATLA KAQANLATQN ALVARYKVLV AANAVSKQDY DNAVATQGQA AADVAAGKAA VDTAQINLGY TDVVSPITGR VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLDG LKLRQDIQSG RIKTEGPGAA KVTLILEDGK AYSEPGKLQF SDVTVDQTTG SVTIRAIFPN KQRVLLPGMF VRARIEEGVN DNAFLVPQIG VTRDPKGQAV AMIVDGKGKV EPRVLTTSGT QGQNWVVEGG LQAGDRVIVQ GIDKVRPGMT VKTAEAQLPA AASGASGAAP AGGSPAQAAA ASAAASGAAP SSAAAASSAK
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