| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0640 |
|---|
| Symbol | |
|---|
| ID | 3848322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 736464 |
|---|
| End bp | 738122 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637840313 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_441196 |
|---|
| Protein GI | 83721118 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG TTGGCGGACA AATTGCGCAC GCGCCGATGA CGGGCGACGA AAAGCGCGTG
ATCTTCGCAT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTCTATCT GGCCGGCTCG
CTGGCGGCCT ACATCAGCAA GAGCTTCTTT TCCGGCGTCA ATCCGACCGC GGCGTTCATC
TTCACGCTGC TCGGCTTCGC GGCGGGCTTC GCGGTCCGGC CCTTCGGCGC GATCGTGTTC
GGCCGCCTCG GCGACCTCGT CGGCCGCAAG CACACATTCC TCATCACGAT CGTGATCATG
GGGATCTCGA CCTTCGTCGT GGGCTTCCTG CCGGGCTACG CATCGATCGG CATCGCCGCG
CCCGTGATCT TCATCGCGAT GCGGCTGATG CAGGGCCTCG CGCTCGGCGG CGAGTACGGC
GGCGCGGCGA CCTACGTCGC CGAGCACGCG CCCGCGCATC GCCGCGGCTT CTATACGTCG
TGGATCCAGA CGACCGCGAC GCTCGGCCTG TTCCTGTCGC TGCTCGTGAT CCTCGGCGTG
CGCACCGCGA TCGGCGAGGA AGCGTTCGGC AACTGGGGCT GGCGCGTGCC GTTCGTCGCG
TCGATCCTGC TGCTCGCCGT GTCCGTGTGG ATCCGCCTGC AACTGAACGA GTCGCCGGTG
TTCCTGCGGA TCAAGGCCGA GGGCAAGACG TCGAAGGCGC CGCTCACGGA AGCGTTCGGC
CAATGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTGATCG GGCTGACGGC CGGCCAGGCG
GTTGTCTGGT ACACGGGCCA GTTCTATGCG CTCTTCTTCC TCACGCAAAC GCTGAAGGTC
GACGGAGGAA GCGCGAACAT CCTGATCGCG CTCGCCCTTT TGATCGGCAC GCCGTTCTTC
GTGTTCTTCG GCTCGCTGTC GGACAAGATC GGCCGCAAGC CGATCATCCT CGCCGGCTGC
CTGATCGCCG CGCTCACCTA CTTCCCGCTC TTCAAGGCGC TCACGCACTT CGCGAATCCG
GCGCTCGAGG CGGCGACGCA AAAGGCGCCG ATCACCGTGG TCGCCAATCC CGGCGAATGC
TCGTTCCAGT TCAACCCGGT GGGCACGGCG AAATTCACGT CGTCCTGCGA CATCGCGAAG
AGCGCGCTCG CGAAATCGGG CCTCAATTAC GAGAACGTCG CCGCGCCGGC GGGCACGCTC
GCGCAGATCA AGATCGGCGA CACGGTGATC GACACGTATG ACGGCAAGGC GGCCGACGCG
AAGGACAAGG CGAAGGCATT CGACAAGACG CTCGCGTCGA CGCTGAAGAC GGCCGGCTAC
CCGACCAAGG CCGATCCGGC GCAGCTCAAC TGGCCGATGA CGACGGCGAT CCTCGCGATT
CTCGTGATCT ACGTGACGAT GGTGTACGGG CCGATCGCGG CGATGCTGGT CGAGATGTTC
CCGACGCGGA TACGCTACAC GTCGATGTCG CTGCCGTATC ACATCGGCAA CGGCTGGTTC
GGCGGCTTCC TGCCGGCAAC CGCGTTCGCG ATCGTCGCGG CCAACGGCGA CATCTACTCG
GGGCTCTGGT ATCCGATCGG CGTCGCGCTC ATCACGTTCG TGATCGGGCT GCTGTTCGTG
AAGGAAACCA AGGATTCGAA TATTTACGCG CAGGATTGA
|
|---|
| Protein sequence | MATVGGQIAH APMTGDEKRV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAAFI
FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLITIVIM GISTFVVGFL PGYASIGIAA
PVIFIAMRLM QGLALGGEYG GAATYVAEHA PAHRRGFYTS WIQTTATLGL FLSLLVILGV
RTAIGEEAFG NWGWRVPFVA SILLLAVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG
QWKNLKIVIL ALIGLTAGQA VVWYTGQFYA LFFLTQTLKV DGGSANILIA LALLIGTPFF
VFFGSLSDKI GRKPIILAGC LIAALTYFPL FKALTHFANP ALEAATQKAP ITVVANPGEC
SFQFNPVGTA KFTSSCDIAK SALAKSGLNY ENVAAPAGTL AQIKIGDTVI DTYDGKAADA
KDKAKAFDKT LASTLKTAGY PTKADPAQLN WPMTTAILAI LVIYVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAANGDIYS GLWYPIGVAL ITFVIGLLFV
KETKDSNIYA QD
|
|---|
| |