| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0478 |
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| Symbol | |
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| ID | 3847842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 530056 |
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| End bp | 531876 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637840151 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_441035 |
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| Protein GI | 83720331 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGC CCTCGAAGCT GTCCCAGAAG CGCCTTGCCG CCGCGCGCGG CCCGCGCGCC
GTTCCGGTGC GCCGCGCGAT CGGCGCCGCG CTCGTCGCGG CGTGGGCGCT CGCCGCGTTT
CCCGCTCACG CGCAAAACGA CGCAGGCGAC GACGCCCCTC AGACCGCGTT CGCGTCGATG
CTGCCGGAAG AGCAGAAGGA TCTGCCGAAC GTCGCGCTGA CGAGCCAGAT CGTCTACCAG
GTGCTCGCGG CCGAGGTCGC GCTGCAACGC AATCTTCCGG CGCCCGCGTA CCAGACCTAT
CTCGCGCTCG CGCGCGACAC GCGCGACCCG CGGATGGCCC AGCGGGCAAC CGAGATTGCG
CTCGCCGCGC AGAGCCCGGC GGACGCGCTG ACGGCCGCGA ATCTGTGGCG CGAATATTCG
CCGGACTCGC AGCGCGCCGC GCAGGTCGAC GCCGCGCTCC TCGTGCTCGG CGGCAAGCCG
GCCGAGGCGC AGCCGATGCT CGCGCAGGAG CTCGCGCGCG CGACGGGCGA CAATCGCGGC
CAGGCGATCA TCGCGCTGCA GGCGCTGCTC GCGCGCGGGC CGAACCGCGT CGGCGGCCTG
ACGGTGCTCC AGGATCTGCT GAAGAACGAC ATGAACCGGC CGGAGGCGCG GCTCGCGATC
GCGCGCCAGC AACTCGCGAC CGACGACAAG GACGGCGCGA CGCAATCGCT GAAGGAAGCG
CTGCGCATCA AGCCCGATTA TCTGCCGGCG GCGCTGATGC TGTCGCAGAT GGGTCCGGGC
GAGCGCGCGG CCGGGATTGC GTCGTTCGAG AAGTTCGTCC AGCAGAATCC GAAGTCGCGC
GACGGCCGCC TCGCGCTCGC GCAACTGTAT CTCGCCGACG ATCGCCTCGA CGACGCGCAG
AAGCAGTTCG ACGCGATGCG CCGCAACGAT TCGAGCGACC CGACGCCGCT GATGGCGATC
GCGCTCATCA AGATCCAGCA GAAGCACCTC GACGACGCGA CCACGTACCT CAAGCAATAC
GTGAAGGTCG CGCAGAAGAA GCCGGGGGCG GACGTCGGCC AGGCGTACGT GTATCTCGCG
CAGATCGCGC TCGACCAGAA CAACGAGGCG CTCGCCGCGC AATGGCTCGA CAAGGTCGAC
GAATCGAGCC AGCAATACGT GCCCGCGCAG GTCACGCGCG CGCAGCTGCT GCAAAAGCAG
GGCAAGACCG ACGAAGCGCG CAAGCTGCTC GCGAACCTGC AGGTGTCCGA TCCGCACGAC
GCCGCGGTGA TCGCGCGCAC CGACGCTTCG ATCCTCTTCG CGTCGAGGCG CTACAAGGAG
GCCGCGGACC GGCTCGCGCA GGCGGTCGAG GATTTCCCGG ACGATCCCGA CCTGCGCTAC
GACTACGCGA TGGCGTGCGA GAAGATCGGC CAATACACGA CGATGGAGCA GCAGTTGCGC
CTGCTGATGC GCGCGCAGCC GGACAATCCG CAGGCCTACA ACGCGCTCGG CTATTCGCTC
GCCGATCGCA ACCTGCGCCT GCAGGAAGCA AGCAAGCTGA TCGAGAAGGC GAACTCGCTC
GCACCGAACG ACGCGTTCAT CATGGACAGC CTCGGCTGGG TCAAGTACCG CCTCGGCGAC
ACGGCGGGCG CGGCGACGAT CCTCAAACGC GCTTACGACC TGCAGCCGAA CGCGGAAATC
GGCGCGCATC TCGGCGAAGT GCTGTGGAAA AGCGGCTCGC GCGACGAAGC GCGCGCCGCA
TGGCGCGCCG CGCAGAAGCT CGAGCCCGAT AACGACACGC TCGTGCAGAC GCTCAAGCGC
TTTCAGGTGA ACGGACTGTG A
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| Protein sequence | MTLPSKLSQK RLAAARGPRA VPVRRAIGAA LVAAWALAAF PAHAQNDAGD DAPQTAFASM
LPEEQKDLPN VALTSQIVYQ VLAAEVALQR NLPAPAYQTY LALARDTRDP RMAQRATEIA
LAAQSPADAL TAANLWREYS PDSQRAAQVD AALLVLGGKP AEAQPMLAQE LARATGDNRG
QAIIALQALL ARGPNRVGGL TVLQDLLKND MNRPEARLAI ARQQLATDDK DGATQSLKEA
LRIKPDYLPA ALMLSQMGPG ERAAGIASFE KFVQQNPKSR DGRLALAQLY LADDRLDDAQ
KQFDAMRRND SSDPTPLMAI ALIKIQQKHL DDATTYLKQY VKVAQKKPGA DVGQAYVYLA
QIALDQNNEA LAAQWLDKVD ESSQQYVPAQ VTRAQLLQKQ GKTDEARKLL ANLQVSDPHD
AAVIARTDAS ILFASRRYKE AADRLAQAVE DFPDDPDLRY DYAMACEKIG QYTTMEQQLR
LLMRAQPDNP QAYNALGYSL ADRNLRLQEA SKLIEKANSL APNDAFIMDS LGWVKYRLGD
TAGAATILKR AYDLQPNAEI GAHLGEVLWK SGSRDEARAA WRAAQKLEPD NDTLVQTLKR
FQVNGL
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