| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0400 |
|---|
| Symbol | dctB |
|---|
| ID | 3849909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 444128 |
|---|
| End bp | 446161 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637840073 |
|---|
| Product | C4-dicarboxylate transport sensor protein |
|---|
| Protein accession | YP_440958 |
|---|
| Protein GI | 83721206 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGCGG AGACGGCGGG GCGCGCAGCG GCGCCCGCGC CGGGCGGGGC CGGGCCGGGC
GCGTCGAAGC GCGCTTCGCA CGGCCCCGCG GCCTTTTCGG GGGGCGGCTA TGCCACAATA
GACGATCCTT ACAGTCCGGA AGCCGTCACC GTGAAGCGCC GCCTGCTCGT CGTTCTCGCG
CTCGCCGCGA TGCTCGCGGC CGCGTGCGCG CTCACGTGGA CCGTCACGTG GCGGCGCGGC
ATCGCCGATC TGCGCGACAG CGCGGCGGCG CGCGTCGACC GCACGACCAA CGCGCTGAAA
AGCACGCTCG ACCGCTACGA ATCGCTGCCG TACCTGCTGG GCGGCCACCC GTTCGTGCAG
GACGTCCTCG CCGCGCCCGG CAATCACCGC TACGTGAATC GCGCGAACGT CTACCTCGAG
GACATGAACC GCCACGCGCA CGCGACGGCG ACCTACGTGA TCACCGCGAA CGGGCTGTGC
GTCGCCGCGA GCAACTGGCG CGGCCCGGAC AGCTTCACCG GCATCGGCTA TCAATTCCGC
CCGTACTTCA TCGATGCGGT GAAGGGCGGC ACCGGCCGCT TCTTCGGGAT CGGCACGATC
TCGCGCGATC CCGGCTACTA CATCTCGCAA CCCGTGCGGC GCGACGGCAA GATCATCGGC
GTCGCGGTCG TCAAGCTCAA TCTCGAGTGG TTCCAGGGCG CGGACGCGTC GGAGCCGCTC
GTCGTCGCCG ACGACCACGG CGTGATCTTC CTGTCGTCGG TGCCGGCGTG GAAGTACCAC
ACGCTCAAGC CGCTGCCGGG GCCGATCGCG ACGTCGATTC ACGAGACGCG CCAGTACGCG
CAGTATCCGG TCACGCCGCT GCCGCTGCGC GTCGAGCGCG TGCTCGGGCC CGATGCGCAG
ATCGTGCGGA TGGGCGCGGG GCGGCGTTCG CCGCGCTATC TCGCGACGCG CCGCCTGCTC
GGCGAGCCCG ACTGGCAGCT CGTCACGCTC GCGCCGATCG AGCCCGTCGA CGTCGACGCG
CGCAATGCGA CGATCGTCAC CGCGTTCGGC TTCGTGTCGC TCGGCCTGCT TGCGTTCTAC
TGGCGCGCGC GCCGCGCGCG CGTGCAGGAG ATGCTGCGCA GCCGCGTGCT GCTGCAAAGC
GCGTATGCGG AGCTGAACCG GCGCGTCGAG GAGCGCACGG CCGATCTGTC GCAGGCGAAC
GCGCGGCTCA AGAAGGAAGT CGGCGAGCGC ATCCGCGCGG AGCAGGAGCT GCGCGCCGCG
CACGACGAGC TCGTTCAGGC GAGCAAGCTC GCCGCGCTCG GCCAGATGGC GGCCGGCATC
ACGCACGAGC TGAACCAGCC GCTCGCCGCG CTGCGCAGCT TCTCCGACAA CACGCGCGTG
CTGCTCGACC GCGGCGAGCA GGCGGCCGCG CGCGAGAATC TCGAGGCGAT CGCGGCGCTC
ACCGAGCGGA TGGGCAAGAT CACGAATCAG CTGAAGCTGT TCGTCGGGCG CGCGAAGCCG
CGCAACGAGC GGGCGCACGT CGCGCGCGCG CTGCGCAACG CGCTCGCGTT GCTCGAGGAG
CGGATGAGAG GCGTCGAGCT CGCGATCGTG CTGCGCGACG AGACGCGCGA TCCCGTCGAA
GCCGTGCGCT TCGATCCGTC GCGGGATGAG CCGGCGCTCG TCGCGCGCTG CGAGGATCTG
CGGCTCGAGC AGGTGCTCAT CAATCTGCTC GGCAACGCGC TCGACGCGGT CGCGGCGGCG
GCCGCGCCGC GCATCGACGT GACGATCGAT GCGACGGCCG CGACGCTTGC GATCGCCGTG
CGCGACAATG GGCCGGGGAT CGCGCCGGAA TCGCTCGCGC GGCTGTTCGA GCCGTTCTTC
ACGACGAAGG AAATGGGGCG CGGGCTCGGG CTCGGCCTCG CGATCTCGTC GTCGATCGCG
CGCGACGCGG GCGGCTCGCT CACCGCGCGC AACGCGCCGG CGGGCGGCGC GGAGTTCGTC
TTGACGCTGC GCCGCGCGCG CACGCATCAT CCGGACACTT CCGCCGCGAG CTGA
|
|---|
| Protein sequence | MCAETAGRAA APAPGGAGPG ASKRASHGPA AFSGGGYATI DDPYSPEAVT VKRRLLVVLA
LAAMLAAACA LTWTVTWRRG IADLRDSAAA RVDRTTNALK STLDRYESLP YLLGGHPFVQ
DVLAAPGNHR YVNRANVYLE DMNRHAHATA TYVITANGLC VAASNWRGPD SFTGIGYQFR
PYFIDAVKGG TGRFFGIGTI SRDPGYYISQ PVRRDGKIIG VAVVKLNLEW FQGADASEPL
VVADDHGVIF LSSVPAWKYH TLKPLPGPIA TSIHETRQYA QYPVTPLPLR VERVLGPDAQ
IVRMGAGRRS PRYLATRRLL GEPDWQLVTL APIEPVDVDA RNATIVTAFG FVSLGLLAFY
WRARRARVQE MLRSRVLLQS AYAELNRRVE ERTADLSQAN ARLKKEVGER IRAEQELRAA
HDELVQASKL AALGQMAAGI THELNQPLAA LRSFSDNTRV LLDRGEQAAA RENLEAIAAL
TERMGKITNQ LKLFVGRAKP RNERAHVARA LRNALALLEE RMRGVELAIV LRDETRDPVE
AVRFDPSRDE PALVARCEDL RLEQVLINLL GNALDAVAAA AAPRIDVTID ATAATLAIAV
RDNGPGIAPE SLARLFEPFF TTKEMGRGLG LGLAISSSIA RDAGGSLTAR NAPAGGAEFV
LTLRRARTHH PDTSAAS
|
|---|
| |