| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0388 |
|---|
| Symbol | |
|---|
| ID | 3848414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 429423 |
|---|
| End bp | 430337 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637840061 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_440946 |
|---|
| Protein GI | 83721094 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAC TCACCAGCAT GGCTGTGTTC GTGAAGGCCG CGGAAACGGG CTCGTTCGCG
GCGGCGGGCG CATCGCTCGG CCTGTCGTCG CAGATGGTCG GCAAGCACGT GCGCTTTCTC
GAGACCCACT ACGGGATGCG GCTCATCAAT CGCACGACGC GCCGCCAGAG CCTGACCGAA
GCCGGCCGCG CGTTCTACGA GCGCAGCCGG GCGGTACTGG CCGAGGCGCA GGCCGTCGAC
GCGCTCGCCG CGAACCTGAT GGCCGCGCCG CGCGGCACGC TGCGCATCAA CGCTCCGATC
AGCTTCGGCG TGCATTGCCT GATGCCGATG CTCGCGTCGT ACATGCGCGC GTATCCGGAG
GTGCAGATTG ATCTGACGTT GAGCGATCGC ATCGTCGATG TCGTCGACGA AGGCTACGAC
GCGGTGATCC GCATCGCGCC GCTCGCCGAT TCCGGGCTGA TCGCGCGGCC GCTCGCGCCG
TACCGGCTCG TGCTGTGCGC GTCGCCCGCG TATCTCGCCG AGCACGGCGC GCCGGCCGAG
CCCGCCGATC TGGCCGCGCA CGAATGCCTC GGGTTTTCGT ATTCGGGGCA GCCGGCGGCG
CTCGAATGGC CGTTCGAGAG CGCGCAGGGG CAGCAGCATT CGGTGCGCGT GAGGAGCCGG
CTCGCGGTCA ACAACGGTGC GGCGCTGCGG ATGGCCGCGC TCGACGGGCT CGGCATCATC
CTGCAGCCGG CCGAGCTCGT GCGCGACGAT CTCGCGGCGG GCCGGCTCGT GCGCCTGCTG
CCCGGCCATG AGCCGCCCGC GCGGCCGATC CATGTGCTGT ATTCGCCCGA TCGGCAGCCG
ACGCCGAAGC TGCGCAGCTT CATCGACGCC GTGATCGCGG CGTTCGGCGA GCGGGCGGGC
GACGGGCGGA CGTGA
|
|---|
| Protein sequence | MDRLTSMAVF VKAAETGSFA AAGASLGLSS QMVGKHVRFL ETHYGMRLIN RTTRRQSLTE
AGRAFYERSR AVLAEAQAVD ALAANLMAAP RGTLRINAPI SFGVHCLMPM LASYMRAYPE
VQIDLTLSDR IVDVVDEGYD AVIRIAPLAD SGLIARPLAP YRLVLCASPA YLAEHGAPAE
PADLAAHECL GFSYSGQPAA LEWPFESAQG QQHSVRVRSR LAVNNGAALR MAALDGLGII
LQPAELVRDD LAAGRLVRLL PGHEPPARPI HVLYSPDRQP TPKLRSFIDA VIAAFGERAG
DGRT
|
|---|
| |