| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0317 |
|---|
| Symbol | plcN |
|---|
| ID | 3849348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 348389 |
|---|
| End bp | 350617 |
|---|
| Gene Length | 2229 bp |
|---|
| Protein Length | 742 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637839990 |
|---|
| Product | non-hemolytic phospholipase C precursor |
|---|
| Protein accession | YP_440875 |
|---|
| Protein GI | 83720180 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGA CGACGCCCCC GGCGCAACGG CGGCGTCCGC GCAACCCGCC TCGAATCCAG
GCTGATCGCT TTTTGCCGCC CCCTCTTCCC CGCAGAGTCA AAGGTGAAAA CATGACGTCA
GAAAGCCGCC GCCGTTTCCT GCATGCCGTT GCGCAATCCG CGAGCGCCGC CGCCGCGCTC
ACCGTGTTTC CCGAATCGAT CCGCCGCGCG CTCGCGATTC CCGCCGCGTC GCGCACGGGC
ACGATCCGCG ATGTCGAGCA CATCGTCGTG TTCATGCAGG AAAACCGCTC GTTCGACCAC
TACTTCGGAC ACCTGCGCGG CGTGCGCGGC TACAACGACC GCTTCCCGAT CACGCTGCCG
AACGGCAAAC CGGTCTGGTA TCAGCCGTCG AAGGCGAACC CGGGCAAGCC GGTGCTGCCG
TTTCGCCTGA ACACGCTGAC GACGAGCGCG CAGTGCATCG GCGACCTCGA TCACTCGTGG
TACAAGACGC ACGCGGCGAT CGACGGCGGC CGCTACGACC AGTGGCCCGC GAACAAGACC
GACATGACGA TGGGCTATCA CGTGCGCGAG GACATTCCGT TCCACTACGC GCTCGCCGAT
GCATTCACCG TCTGCGACAA CTACTTCTGC TCGCTGCCCG GCCCGACGCA TCCGAACCGC
TCGTATCTGA TGACGGGCAC CGTCGACCCA ACCGGCAAGT ACGGCGGCCC GCTTCTCGAC
AACAGCGATT ACGTCGACGG CGACGCGCCG CCGAAATACG ACTTGCTCAC GTGGACCACG
TACCCCGAGC GCCTCGAGGC GAACGGCATC TCGTGGCAGA TCTACCAGCA AGGCACGACG
GGCGCCGATC CGCTGAACGG CAACTACGGG ACGAACATCC TGCAGAACTT CGCGAACTTC
ATCGACGCGA AGCCGGGCTC GTCGCTGTAT CGGCGCGCGC AGACGGCGCG CACGCTCGAC
GACCTGAAGG CCGACGTGCT CGCGAACAGG CTGCCGCAGG TGTCGTGGCT GCTGCCGCCC
GCGGCATTCT CCGAGCATCC GAAATACACG CCCGCGTACG GCGCGAACTA CACGTCGCAA
ATCCTCGACG CGCTGACGTC GAACCCCGAC GTGTGGCGCA AGACCGTGCT CTTCATCATG
TACGACGAGA ACGACGGCTT CTTCGATCAC GTCGTGCCGC CGCAGCCGGC GACGACGCGC
GCGCAGGGCC TGTCGACCGT GCCCGTCGAC GGCGAGATCC ACGACGTCGT GAACCCGGGC
CGCGGCGGCA GCTACACGGC CGACGGCCTG CCGTACGGCC TCGGCCCGCG CGTGCCGATG
ACGGTCGTGT CGCCGTGGAC GAAGGGCGGC TTCGTGTGCT CGCAGGTGTT CGACCATACG
TCGGTGATCC GCTTCATCGC CGCGCGCTTC GGCGTCGACG AGCCGAACAT CACGCCGTGG
CGCCGCGCGG TGTGCGGCGA CCTCACGTCC GCGTTCGACT TCCGCACGCC GGACGCGACA
CTGCCGCCGC TGCCCGACAC GAGCAACTAT CGGTCGATCG CCGACCAGCT CTGCTCGACG
AAGCCCGCGC CGAGCGTGCC CGCCGCGCCG AGTCCCGTCG ATCCGCAGGA GCCCGGCGTG
CGCCCGGCGC GCGCGCTGCC GTACGAGCTG CACGTGAACG CGACGGTGCA CGGCGGCGCG
CGCTTGCGCA TCGAGTTCGC GAATCGCGGC GAACAGGGCG CGCACTTCTA CGTGTACGCG
TCGAATCGCA GCGACGGCCC GTGGCGCTAC ACGGTGGGCG CACACCGCTC GCTGCACGAC
GAATTCGATC TCGGCGCGAC GAACGGCGCG TATGCGTTCA CCGTATATGG TCCGAACGGC
TTCGTGCGCG TGTTCGAAGG GCTCGCCGCA GCCGAGGGGC ACGGCCGGCA TGCGGCCGCG
CATCCGGAAG TGAAGGCGGG CTACGACGTC GCGAACGGCA ACCTGTATCT GAAGCTCACG
AATCACGGCG GACAGAGCGT GCGACTGACG CTCGCCGACA ACGCGTACGG CGCGCCGCCG
CGCCAGATCA CGCTGCGCGG CGGCGACGAG CGGGTGGAGC AATGGGCGCT TGCCCCGAGC
CATCACTGGT ATGACGTGAC GGTGTCGGAC GGCGCGACCG GCCAGTTCGT GCGCCGCTTC
GCCGGGCACG TCGAAAACGG CAAGTCGAGC TATTCCGATC CGGCAGCAGT CGCGCCCGTC
ACGGGCTGA
|
|---|
| Protein sequence | MAPTTPPAQR RRPRNPPRIQ ADRFLPPPLP RRVKGENMTS ESRRRFLHAV AQSASAAAAL
TVFPESIRRA LAIPAASRTG TIRDVEHIVV FMQENRSFDH YFGHLRGVRG YNDRFPITLP
NGKPVWYQPS KANPGKPVLP FRLNTLTTSA QCIGDLDHSW YKTHAAIDGG RYDQWPANKT
DMTMGYHVRE DIPFHYALAD AFTVCDNYFC SLPGPTHPNR SYLMTGTVDP TGKYGGPLLD
NSDYVDGDAP PKYDLLTWTT YPERLEANGI SWQIYQQGTT GADPLNGNYG TNILQNFANF
IDAKPGSSLY RRAQTARTLD DLKADVLANR LPQVSWLLPP AAFSEHPKYT PAYGANYTSQ
ILDALTSNPD VWRKTVLFIM YDENDGFFDH VVPPQPATTR AQGLSTVPVD GEIHDVVNPG
RGGSYTADGL PYGLGPRVPM TVVSPWTKGG FVCSQVFDHT SVIRFIAARF GVDEPNITPW
RRAVCGDLTS AFDFRTPDAT LPPLPDTSNY RSIADQLCST KPAPSVPAAP SPVDPQEPGV
RPARALPYEL HVNATVHGGA RLRIEFANRG EQGAHFYVYA SNRSDGPWRY TVGAHRSLHD
EFDLGATNGA YAFTVYGPNG FVRVFEGLAA AEGHGRHAAA HPEVKAGYDV ANGNLYLKLT
NHGGQSVRLT LADNAYGAPP RQITLRGGDE RVEQWALAPS HHWYDVTVSD GATGQFVRRF
AGHVENGKSS YSDPAAVAPV TG
|
|---|
| |