Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0288 |
Symbol | glmS-1 |
ID | 3849855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 321874 |
End bp | 323706 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637839961 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_440846 |
Protein GI | 83719848 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCGGGA TTGTCGGCGC GGTTGCGCAA CGTAACATCG TTCCGGTGCT GATCGAAGGA CTGCGCCGTC TCGAGTATCG CGGCTACGAC TCGTGCGGCG TCGCGGTGCT CGGCGCCGGC GCGCCTGCGC CGGGCGCGCC GAGGCGCGCG CGCAGCGTCG CGCGCGTCGC CGATCTCGAT GCGCAGGTGC GCGAGTCGCA TCTCGGAGGC GTAACCGGCA TCGCGCACAC GCGCTGGGCG ACGCACGGCG CGCCCGTCAC GCACAACGCG CACCCGATCT TCTCGTCGAA CGCGCTCGCG CTCGTGCACA ACGGCATCAT CGAGAACTTC GAGCCGCTGC GCGAGGGGCT GCGCGCGAAG GGCTACGCGT TCGTATCGCA GACCGACACC GAAGTCATCG CGCACCTGAT CCACAGCCTC TATCGCGGCA ACCTGTTCGC GGCCGTGCAG GAAGCCGTCA AGCAGTTGCA CGGCGCGTAC GCGATCGCGG TGATCCACCA GGACGAGCCG CACACCGTCG TCGGCGCGCG CCAGGGCTCG CCGCTCGTCG TCGGCTTCGG CGAACAAGAG AACTTCCTCG CGTCCGACGC GCTCGCGCTC GCGGGCAGCA CCGATCGCTT CACGTTCCTC GAGGAAGGCG ACGTCTGCGA GCTGACGCTC GCGGGCGTGA CGATCGTCGA TCGCGACGGC GCGCGCGCCG TGCGCGAGGT GCGCGTCGTC GCCGCATACG GCGGCGCGGT CGAGCTCGGC CCGTATCGGC ACTTCATGCA GAAGGAAATC TTCGAGCAGC CGCGCGCGAT CGCCGACACG ATTGCGCAAG CGGACGCGTT CGATCCGTCG CTGTTCGGCG AGCGCGCGGG CAGCGTATTC GCGGGCATCG ACAGCCTGCT GATCCTCGCG TGCGGCACCA GCTACTACTC GGGCCTCACC GCGAAGTACT GGCTCGAATC GATCGCGAAA ATCCCGACGC AAGTCGAGAT CGCGAGCGAA TACCGCTATC GCGAATCGGT GCCGAACCCG CGCGCGCTCG TCGTCGTGAT CTCGCAGTCG GGCGAGACGG CCGATACGCT CGCCGCGCTC AAGCACGCGC AGGCGCTCGG CCACGCGCAC ACGCTCGCGA TCTGCAACGT CGCGACGAGC GCGATGGTGC GCCAGACCGA GCTGCAGTTC CTCACGCACG CGGGCACCGA GATCGGCGTC GCTTCGACGA AGGCGTTCAC GACGCAGCTC GTCGCGCTGT TCGTGCTCGC GGCGACGCTC GGCAAGCTGC GCGGCCACGT CGACGCGGCC CGCGAAGCCG ATTACCTGAA GCAGTTGCGC CACCTGCCCG CCGCGCTCAA CAGCGTGCTC GCGCTCGAGC CGCAGATCAT CGCGTGGTCC GAAGAGTTCG CGCGTAAGGA AAACGCGCTG TTCCTCGGCC GTGGGCTGCA CTATCCGATC TCGCTCGAAG GCGCGCTGAA GCTCAAGGAG ATCTCGTACA TCCACGCGGA AGCGTATCCG GCGGGCGAAC TGAAGCACGG GCCGCTCGCG CTCGTGACGG AGGCGATGCC GGTCGTCACC GTCGCGCCGA ACGACACGCT GCTCGAGAAG CTGAAATCGA ACATGCAGGA AGTGCGCGCG CGCGGCGGCG AGCTGTACGT GTTCGCCGAC GCGGACACGC ACATCGTCAA CGACGAAGGG CTGCACGTGA TCCGGATGCC CGAGCATTAC GGGCCGCTGT CGCCGATCCT GCACGTCGTG CCGCTGCAGT TGCTCGCGTA TCACACCGCG TGCGCGCGCG GCACCGACGT CGACAAGCCG CGCAATCTCG CGAAATCCGT GACGGTGGAG TAA
|
Protein sequence | MCGIVGAVAQ RNIVPVLIEG LRRLEYRGYD SCGVAVLGAG APAPGAPRRA RSVARVADLD AQVRESHLGG VTGIAHTRWA THGAPVTHNA HPIFSSNALA LVHNGIIENF EPLREGLRAK GYAFVSQTDT EVIAHLIHSL YRGNLFAAVQ EAVKQLHGAY AIAVIHQDEP HTVVGARQGS PLVVGFGEQE NFLASDALAL AGSTDRFTFL EEGDVCELTL AGVTIVDRDG ARAVREVRVV AAYGGAVELG PYRHFMQKEI FEQPRAIADT IAQADAFDPS LFGERAGSVF AGIDSLLILA CGTSYYSGLT AKYWLESIAK IPTQVEIASE YRYRESVPNP RALVVVISQS GETADTLAAL KHAQALGHAH TLAICNVATS AMVRQTELQF LTHAGTEIGV ASTKAFTTQL VALFVLAATL GKLRGHVDAA READYLKQLR HLPAALNSVL ALEPQIIAWS EEFARKENAL FLGRGLHYPI SLEGALKLKE ISYIHAEAYP AGELKHGPLA LVTEAMPVVT VAPNDTLLEK LKSNMQEVRA RGGELYVFAD ADTHIVNDEG LHVIRMPEHY GPLSPILHVV PLQLLAYHTA CARGTDVDKP RNLAKSVTVE
|
| |