| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0220 |
|---|
| Symbol | |
|---|
| ID | 3849768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 252601 |
|---|
| End bp | 254229 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637839893 |
|---|
| Product | dipeptide ABC transporter, periplasmic didpeptide-binding protein |
|---|
| Protein accession | YP_440778 |
|---|
| Protein GI | 83721240 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.63568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATA ACCGTCTGTT GCGCGCACTG CGTGTTACCG CCATCGCGGG CGTTGCAGCG
GCATCGTTTG GCGTCGCGGG TTCTGCATTC GCACAGATCC CGAACAAAAC GCTCGTCTAC
TGCTCAGAAG GCAGCCCGGC GGGCTTCGAT TCCGCGCAGT TCACGACGGG CGTCGATTTC
ACCGCGTCAA CGTTCCCGAT CTACAACCGC CTCGTCGAGT TCGAGCGCGG CGGCACGAAG
GTCGAGCCCG GCCTCGCCGA GAAGTGGGAC ATCTCGCCCG ACGGCAAGGT CTACACGTTC
CATCTGCGCC ACGGCGTCAA GTTCCATACG ACCGATTTCT TCAAGCCGAC GCGCGAATTC
AACGCGGACG ACGTCGCGTT CACGTTCGAG CGGATGATCG ATCCGAACCA GCCGTTTCGC
AAGGCGTATC CGGTGTCGTT CCCGTACTTC ACCGACATGG GCCTGGACAA GCTGATCGTG
AAGATCGAGA AGGTCGATCC GTATACGGTC CGCTTCACGC TGAAGGAGCC GAACGCGCCG
TTCATCCAGA ACCTCGCGAT GGAATACGCG TCGATCCTCT CCGCCGAATA CGCGGACCAG
CTGATGAAGG CGGGCAAGGC CGCCGACATC AATCAGAAGC CGATCGGCAC GGGCCCGTTC
ATCTTCCGCA GCTACACGAA GGACGCGACG ATCCGCTTCG ACGGCAATCC TGATTATTGG
AAGAAGGGCG CGGTGAAGAT CTCGAAGCTG ATCTTCTCGA TCACGCCCGA TCCGGGCGTG
CGCGTGCAGA AGATCAAGCG CAACGAGTGC CAGGTGATGA GCTATCCGCG GCCCGCCGAC
ATCGCGACGC TGAAGGCCGA TCCGAACGTC GACATGCCGT CGCTGCCGGG CTTCAACCTC
GGCTACCTCG CGTACAACGT GCAGCACAAG CCGGTCGACA AGCTCGAGGT GCGCCAGGCG
CTCGACATGG CGATCAACAA GAAGGCGATC CTCGAATCCG TCTATCAGGG CGCGGGGCAG
GCGGCGAGCG CGCCGATGCC GCCGACCCAA TGGTCGTACG ACAAGAACCT GAAGGCCGCC
GCCTACGATC CGGCGAAGGC GAAGGCGCTG CTCGCGAAGG CGGGCTACCC GAACGGCTTC
CCGATCACAC TGTGGGCGAT GCCCGTGCAG CGCCCGTACA ACCCGAACGC GAAGCTGATG
GCCGAGATGA TCCAGGCCGA CTGGGCGAAG ATCGGCGTGC AGGCGAAGAT CGTCACGTAC
GAGTGGGGCG AGTACATCAA GCGCGCGCAT GCGGGCGAGC ACGACACGAT GCTGATCGGC
TGGAACGGCG ACAACGGCGA CCCCGACAAC TGGCTCGGCA CGCTGCTCGG CTGCGAGGCG
GTCAAGGGCA ACAACTTCTC CGAGTGGTGC TACAAGCCGT TCGACGAGCT GATCCAGAAG
GGCCGCGTGA CGACCTCGCA GGATGCCCGC GCGAAGATTT ACATGCAGGC GCAGCAGATC
TTCGCGCAAC AACTGCCGTT TTCGCCGATC GCGAACTCGA CCGTCTATCA GCCGGTGCGC
AAGAACGTCG TCGACATGCG GATCGAGCCG CTCGGCTATG CGCGCTTCGA CGGCGTCAGC
GTGAAATAA
|
|---|
| Protein sequence | MEHNRLLRAL RVTAIAGVAA ASFGVAGSAF AQIPNKTLVY CSEGSPAGFD SAQFTTGVDF
TASTFPIYNR LVEFERGGTK VEPGLAEKWD ISPDGKVYTF HLRHGVKFHT TDFFKPTREF
NADDVAFTFE RMIDPNQPFR KAYPVSFPYF TDMGLDKLIV KIEKVDPYTV RFTLKEPNAP
FIQNLAMEYA SILSAEYADQ LMKAGKAADI NQKPIGTGPF IFRSYTKDAT IRFDGNPDYW
KKGAVKISKL IFSITPDPGV RVQKIKRNEC QVMSYPRPAD IATLKADPNV DMPSLPGFNL
GYLAYNVQHK PVDKLEVRQA LDMAINKKAI LESVYQGAGQ AASAPMPPTQ WSYDKNLKAA
AYDPAKAKAL LAKAGYPNGF PITLWAMPVQ RPYNPNAKLM AEMIQADWAK IGVQAKIVTY
EWGEYIKRAH AGEHDTMLIG WNGDNGDPDN WLGTLLGCEA VKGNNFSEWC YKPFDELIQK
GRVTTSQDAR AKIYMQAQQI FAQQLPFSPI ANSTVYQPVR KNVVDMRIEP LGYARFDGVS
VK
|
|---|
| |