| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0194 |
|---|
| Symbol | |
|---|
| ID | 3848040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 226893 |
|---|
| End bp | 228539 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637839867 |
|---|
| Product | GMC family oxidoreductase |
|---|
| Protein accession | YP_440752 |
|---|
| Protein GI | 83719292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTACG ACTACATTAT CGTTGGAGCC GGCTCGGGCG GCTCGAGCCT CGCGGGGCGT
CTGGCCGACG CGTGCCCGGA TGCGACGATC GCGCTGATCG AAGCGGGCGG TCATACCGAA
CGCAATCTGC TCGTCAACAT GCCGGTGGGG ATCGCCGCGC TCGTGCCGTT CAAGCTGGGC
ACGAACTACG GCTACGAAAC GGTGCCGCAG CCGGGCCTCG GCGGGCGCCG CGGCTATCAG
CCCCGCGGCC GCGGGCTCGG CGGCTCGAGC GCGATCAACG CGATGATCTA CACGCGCGGC
CATCCGCTCG ACTACGACGA GTGGGAGCAG CTCGGCTGCA CCGGCTGGGG ATGGCGCGAC
GTGCTGCCGT ACTTTCGCCG CGCCGAAGGC AACGAGCGCG GCGCGAACGA ATGGCACGGC
GCGGACGGCC CGCTCACGGT GTCCGATCTG CGCTTCCGTA ATCCGTTCTC CGAACGATTC
ATCGCGGCCG CGCACGAGGC CGGCTATCCG CTGAACGACG ACTTCAACGG CGAGCGCCAG
GAAGGCGTCG GCTTCTACCA GGTCACGCAT CGCGACGGCT CGCGCTGCAG CGTCGCGCGT
GCGTACGTGT ACGGCCGCAC GCGGCCGAAC CTGCACGTGA TCGTCGATGC GACGGTGCTG
CGCGTCGTGT TCGACGGCAA GCGCGCCACG GGCGTCGAGC TTGCGCGCGG CGGGCGCGTC
GAAAAGCTCG ATGCGCGCGC GGAAGTGATT TTGTCCGCCG GCGCGTTCAA TACGCCGCAA
TTGCTGATGT GCTCGGGCGT CGGCCCCGCC GCGCAACTGC GCCGCCACGG CATCGCGCTC
GTGCACGACG CGCCCGATGT CGGCCAGAAC CTGATCGATC ACATCGATTT CATCGTCAAC
AAGCGCGTGA ATTCGTCGGA GCTCGTCGGC ATCTGCTTGC GCGGGATCGC GAAGATGACG
CCCGCGCTGT TCAGCTATCT GTCCAGGCGC CGCGGGATGA TGACGAGCAA CGTCGCCGAG
GCGGGCGGCT TCATCAAGAG CGCGCCCGGA CTCGACCGTC CCGATCTGCA ATTGCACTTC
TGCACCGCGC TTGTCGACGA CCACAACCGC AACATGCACT GGGGCTTCGG CTATTCGCTT
CACGTGTGCG CGTTGCGGCC GAAGAGCCGC GGCAACGTCG CGCTCGCGAG CAGCGACGCG
CGCGTCGCGC CGCTCATCGA TCCGCGCTTT TTCAGCGACG AACGCGATCT CGATCTGCTC
GTCACGGGCG CGAAGGCGAT GCGCAGGATT CTGTCGGCCG CGTCGCTCGC GTCGCAGGGC
GGGCGCGAAC TGTATACCGA TCCGGGCGAC ACCGACGCGC AGCTGCGCGC CGCGATCGTC
GCGCATGCGG ACACGATCTA CCACCCGGTC GGCACGTGCC GGATGGGCGC CGACGCGCGC
GCGGTCGTCG ATCCGCAATT GCGCGTGAAA GGGGTGGACG GGCTGCGGAT CGTCGATGCG
TCGGTGATGC CGACGCTGAT CGGCGGCAAC ACGAATGCGC CGACCGTGAT GATCGGCGAG
CGCGCGGCGG ATTTCATCGT GGCCGCGCGC AACGGGCAGG CCGTGCCCGC GCCTCGCGAG
CGGCTCGCGG CGGCGCACGG CGGCTGA
|
|---|
| Protein sequence | MQYDYIIVGA GSGGSSLAGR LADACPDATI ALIEAGGHTE RNLLVNMPVG IAALVPFKLG
TNYGYETVPQ PGLGGRRGYQ PRGRGLGGSS AINAMIYTRG HPLDYDEWEQ LGCTGWGWRD
VLPYFRRAEG NERGANEWHG ADGPLTVSDL RFRNPFSERF IAAAHEAGYP LNDDFNGERQ
EGVGFYQVTH RDGSRCSVAR AYVYGRTRPN LHVIVDATVL RVVFDGKRAT GVELARGGRV
EKLDARAEVI LSAGAFNTPQ LLMCSGVGPA AQLRRHGIAL VHDAPDVGQN LIDHIDFIVN
KRVNSSELVG ICLRGIAKMT PALFSYLSRR RGMMTSNVAE AGGFIKSAPG LDRPDLQLHF
CTALVDDHNR NMHWGFGYSL HVCALRPKSR GNVALASSDA RVAPLIDPRF FSDERDLDLL
VTGAKAMRRI LSAASLASQG GRELYTDPGD TDAQLRAAIV AHADTIYHPV GTCRMGADAR
AVVDPQLRVK GVDGLRIVDA SVMPTLIGGN TNAPTVMIGE RAADFIVAAR NGQAVPAPRE
RLAAAHGG
|
|---|
| |