Gene BTH_I0185 details

Gene Information

• Locus tag: BTH_I0185
• ID: 3848694
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 214983
• End bp: 215993
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637839858
• Product: 5-dehydro-4-deoxyglucarate dehydratase
• Protein accession: YP_440743
• Protein GI: 83720207
• COG category: [E] Amino acid transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase
• TIGRFAM ID: [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACTTGA ATCGTTCACG GTGCAAGAAT CCGCTCACCA CTTGTCACGC CGCACCGGCA 
CGAACGCTCA TGTCACGCTA TACGCCCACC GAATTCGCCC GCCAGATCGG CTCTGGCCTG 
CTGTCTTTCC CGGTCACGCA TTTCAGGGCC GATCTGTCGT TCGACGAGGC CGCCTATCGC 
GCGAACCTCG GCTGGCTCTT CAGCCACGAC GCCGCAGGCC TCTTCGCCGC AGGCGGCACG 
GGCGAGTTCT TCTCGCTCAC GCCCGCCGAA GTCGATCGCG TCGTGCGCGC GGCCGTCGCC 
GAGACGGGCG GCCGGCTGCC CGTGATCGCG CCGGCGGGCT ACGGCACCGC GATGGCGATC 
GACTATTGCA AGGCCGCCGA GGCGGCGGGC GCCGACGGCA TCCTGCTGCT GCCGCCGTAT 
CTGACGGAGG CGTCGGCGGA CGGCGTCGCC GCGCACGTCG AGCAGGTCTG CCGCGCGACG 
CGCCTCGGCG TGATCGTCTA CAACCGCGCG AACCAGGTGC TCGACGAAAA CGCGCTCGCG 
CGCCTCGCCG AGCGCTGCCC GAACCTCGTC GGATTCAAGG ACGGCGTCGG CGACATCGAG 
CTGATGACGC GCATCTACAC GCGGCTCGGC GAGCGCTTCA CCTACATCGG CGGCCTGCCG 
ACTGCGGAGA CGTTCGCGCT GCCGTACCTC ACGCTCGGCG TGACGACGTA CTCGTCGGCG 
ATCTTCAACT TCGTGCCGCG CTTCGCGCTC GATTTCTACG CGGCCGTGCG CGCGCAGGAC 
CACGCGAAGG TGTACGCGAT GCTCGATCAG TTCGTTCTGC CGTACATCGC GCTGCGCAAT 
CGCAAGCGCG GCTATGCCGT GTCGATCGTG AAGGCCGGGA TGAGGGTGGT CGGACGCAGC 
GCAGGCCCCG TGCGTGCGCC GCTGACCGAT CTGACGGGCG CGGAACTGGC CGAGTTGTCG 
GCGCTCGTCG CCCGGATCGC CGACGTCGCC GAGGCGCAAG CATGTCTGTG A 

 

Protein sequence

MDLNRSRCKN PLTTCHAAPA RTLMSRYTPT EFARQIGSGL LSFPVTHFRA DLSFDEAAYR 
ANLGWLFSHD AAGLFAAGGT GEFFSLTPAE VDRVVRAAVA ETGGRLPVIA PAGYGTAMAI 
DYCKAAEAAG ADGILLLPPY LTEASADGVA AHVEQVCRAT RLGVIVYNRA NQVLDENALA 
RLAERCPNLV GFKDGVGDIE LMTRIYTRLG ERFTYIGGLP TAETFALPYL TLGVTTYSSA 
IFNFVPRFAL DFYAAVRAQD HAKVYAMLDQ FVLPYIALRN RKRGYAVSIV KAGMRVVGRS 
AGPVRAPLTD LTGAELAELS ALVARIADVA EAQACL