| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0128 |
|---|
| Symbol | def |
|---|
| ID | 3848354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 157957 |
|---|
| End bp | 158496 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637839801 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_440687 |
|---|
| Protein GI | 284159413 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGG GTCGTTCGTC TCTCAACACT GAAATCATGG CTTTGCTGAA CATCCTTCAT
TACCCCGACA AACGGCTGCA CAAGGTGGCC AAGCCGGTCG ACAAGGTGGA CGACCGTATT
CGCAGGCTCG TCGCCGACAT GGCCGAGACG ATGTACGCGG CGCCCGGCAT CGGGCTCGCG
GCGACGCAGG TCGACGTGCA CGAGCGCGTG ATCGTGATCG ACGTGTCCGA GGACAAGAAC
GAGCTGCGCG TTTTCATCAA TCCGGAGATC GTCTGGACGA GCGACGGCAA GCAGGTCTAC
GAGGAAGGCT GTCTGTCGGT GCCGGGCGTC TATGACGAAG TCGAGCGGCC TGACCGCGTG
CGCGTGCGCG CGCTCGACGA GCAAGGCGAG CCGTTCGAGC TCGATTGCGA AGGGCTGCTC
GCGGTGTGCA TCCAGCACGA GATGGATCAC CTGATGGGCC GCGTGTTCGT CCAGTATCTG
TCGCCGCTCA AGCAGACCCG GATCAAGACG AAGATGAAGA AACTCGAACG CGCAATGTGA
|
|---|
| Protein sequence | MRAGRSSLNT EIMALLNILH YPDKRLHKVA KPVDKVDDRI RRLVADMAET MYAAPGIGLA
ATQVDVHERV IVIDVSEDKN ELRVFINPEI VWTSDGKQVY EEGCLSVPGV YDEVERPDRV
RVRALDEQGE PFELDCEGLL AVCIQHEMDH LMGRVFVQYL SPLKQTRIKT KMKKLERAM
|
|---|
| |