Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0054 |
Symbol | |
ID | 3847468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 57884 |
End bp | 59554 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637839727 |
Product | GMC oxidoreductase |
Protein accession | YP_440614 |
Protein GI | 83718932 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.810146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCGG CAACCCCCAA AGGCTCGACG GAATTCGACT ACATCGTGAT CGGCGGCGGC TCGGCCGGCT GCGTCGCCAC GCACCGGCTC GTCAATGCCG GGCATCGCGT GCTGCTGCTC GAAGCCGGCC CGCCCGACAA TTCGTTCTTC GTCCACACGC CCGCGACGTT CGTGCGCGTG ATCGGCACGA AGCGGACCTG GGTCTACGAG ACGGAGCCGC AGGCGCACGC GGCCGGCCGG CGCATGTACG TGCCGCAGGG CCGCACGCTC GGCGGCGGCA GTTCGGTGAA CGCGATGGTC TACATCCGCG GCACGCCCGC CGATTACGAC GGCTGGCGCG ACGCCGGCTG CGACGGCTGG GGCTGGGACG ACGTGCTGCC GTTTTTCCGG CGCGCCGAGC GCAACCACCG GCTCGCGGGG CCGCTGCACG GCGCCGACGG GCCGCTGCAC GTGAGCGACG CGCGCTTTCG TCATCCGCTG AGCGACGCGT TCGTGCAGGG CGCGCAGGAG TTCGGGCTGC CGTACAACGA CGACTTCAAC GGCGCGTCGC AGGCGGGCGT CGGCTTCTAT CAGACGACGA CGTTCGAAGG CCGGCGCGGC AGCACCGCCG CGACGTATCT CGCCGCCGTC AAGCGCGATC CGCTGCTGAC GATCGAGACC GACGCGTTCG TCACGCGCAT CGTGTTCGAG AACGGCGCGG CGGTCGGCGT GCGCTACCGT GCGCGCGGCG GCGAGGAGCG GCTCGTGCGC GCACGCGCGG AGATCGTGCT TTGCGCGGGC GCGCTCGCGA GCCCGAAGCT CCTGATGCTG TCGGGCATCG GCCCGGCGGA TCAGCTCCGG CAGCACGGCA TCGCGGTCGT GCACGATTCG CCCGAGGTCG GACTCAACTT CCAGGACCAT CTCGAAGTGT CGCTGTATGG CCGCGCGCGC GCGCCGATCA GCCTCGCGGG CCAGGACCGC GGGCTCAACG CGCTGCGCCA CGGCATCCAG TACACGCTGT TCCACACGGG GCTCCTCACG TCGAACGTCG TCGAGAGCGG CGGCTTCGTC GATACCGCGA ACGGCGGCCG CCCCGACGTG CAGTTCCACG TGCTGCCCGT GCTCGTCGGC GACGTCGGCC GCGAGCCGCT CGAAGGGCAC GGGATCTCGA TCAACCCGTG CTTCCTGCGG CCGAAGTCGC GCGGCACGGT GCGCCTGCGC AACGCCGATC CGCTCGCGCC GATTCTGTTC GACGGCAATT TCCTCAGTCA TCCGGACGAT TTCGCGACGC TCGTGCGCGG GCTTTCGCTC GCGCGCGAGA TCATGCGCAT GCCGTCGATG TCGAAGGCGA TCGCGGGCGA GATGCTGCCG ACCGACGGCG GCCGCGTCGA TCTCGACGCA TACGTGCGCT CGCACGCGAA GACCGTCTAT CACCCGTCGG GCACGTGCCG GATGGGCGGC GATCCGGGCT CGGTCGTCGA TTCGCAGCTG CGCGTGCGCG GCGTCGGCGG GCTGAGGATC TGCGATGCGT CGGTGATGCC GTCGCTCGTG TCCGGCAACA CGAATGCGCC GACGATCATG ATCGCCGAGC GCTGCGCCGA ATTCATGCTG TCGCCCGCGC TCGCGCCGAA CGCGCGCGCC GGCGCGAGCG CGCCGCGGGC CGCACCGCTG GACGCGGGCC ATGCGCGCTG A
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Protein sequence | MSAATPKGST EFDYIVIGGG SAGCVATHRL VNAGHRVLLL EAGPPDNSFF VHTPATFVRV IGTKRTWVYE TEPQAHAAGR RMYVPQGRTL GGGSSVNAMV YIRGTPADYD GWRDAGCDGW GWDDVLPFFR RAERNHRLAG PLHGADGPLH VSDARFRHPL SDAFVQGAQE FGLPYNDDFN GASQAGVGFY QTTTFEGRRG STAATYLAAV KRDPLLTIET DAFVTRIVFE NGAAVGVRYR ARGGEERLVR ARAEIVLCAG ALASPKLLML SGIGPADQLR QHGIAVVHDS PEVGLNFQDH LEVSLYGRAR APISLAGQDR GLNALRHGIQ YTLFHTGLLT SNVVESGGFV DTANGGRPDV QFHVLPVLVG DVGREPLEGH GISINPCFLR PKSRGTVRLR NADPLAPILF DGNFLSHPDD FATLVRGLSL AREIMRMPSM SKAIAGEMLP TDGGRVDLDA YVRSHAKTVY HPSGTCRMGG DPGSVVDSQL RVRGVGGLRI CDASVMPSLV SGNTNAPTIM IAERCAEFML SPALAPNARA GASAPRAAPL DAGHAR
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