Gene BTH_I0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0016 
Symbol 
ID3849812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp17464 
End bp18834 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content73% 
IMG OID637839689 
Productgeneral secretion pathway protein L (GspL) 
Protein accessionYP_440576 
Protein GI83719668 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTGC AGGAATGGCA ATGGCCCGAG CTGCCGTTCG CGCTCGTCGA CAAGAGCGGC 
CACACGCAGC GCGCGGGCCG CGCGGCGCTC GCGCTGCTGC CGCAGGCGGC GACGACGGTG
CTCGTCGTCG CCGCGCGCGA CCTGCTGATG CTCGAGCAGG CGCTGCCGCC GCTGAAAGGG
CCGAAACTGA AGCAGGCGCT GCCGAACATC ATCGAGGATC AACTGATCCA GGATCCGCAG
GGCTGCCACA TCGCGGTCGA CCCGGTGGCG CTCGACGGCG GGCGCCGCGT GCTCGCGGTG
ATCGACCGCG CGTGGTTCAA GTTCATCGTC GACGCGTTCG CCGCGGCGGG GCATCGCCAT
CTGCGCGCGG TGCCCGTCAC ACGCTGCCTG CCGCCCGCGA CGCGGCGCGA TACGGCCGAG
GCCGCCGTCG AAGCCGTCGC GATGCACGAA GCGGCGGCCG GCGCGCCGGG CGATGGCCAC
GCGGCCGCCG AAGGCGCGAG CGCGGACACC GTCGCGCTGC CCGAGCCGAT CGTCGCGGTC
GCGCTTGGTC TTGCCGCCAC GGCGAGCGCG CCGTCGCTCG CCGAGGAATC CGCGGCGCTG
CTGCCGGAGA CGGCCGCCGC GCCGCGCGTC GAACTCGCGC TCGCGCGCGG CGCGCTCGGC
GAAGGTTTCG CCGCGCCGGT GTCGACCGCG GTGCCGACGC TCGAAGCGCT CGCGAACGGC
ACGCCGCTCG AGCTCTACGA GCTCGGCGAG CCGGGCGCCG AGCCGCAGCT CGCGTCGGTG
CGGCCGCTCG ACGACAAGCG CCTGCTGCCG GGCGCGGCGA TCTGGCCGTT CGACGCGCTC
GTGCGCCGCG CGCTCGACGC GCGCTTCGAC CTGTGCCAGT TCGAATTCGA GTTCGCGCCG
TGGCGCTTCG ACCACGCGAC GTTCATGCGC CTGCGCGTGC CGCTCGCGCT GGCGGCGGCG
ACGCTCGTCG TCGCGGTGAT CGGCGTGAAC GCGCACTGGT GGAAGCTCTC GCGCGAACGC
GACGCGCTCG CCGCGCAGAT CACCGAGACG CTGCTGACGG CGTTTCCGAA GACGACGACG
GTGCTCGATC CGGCCGCGCA GATGACGCGC CAGCTCGACC GGCTGCGGAT CGCGGCGGGC
GAGTTGTCGC CGAACGATTT CCTGTCGCTC GCGAGCCGCC TCGCGCGCTC GCTCGGCCCG
CTGCCGCCGA ACGGCATCGC GTCGCTCGAC TATCACGATC GCCGGCTCGA CGTCGGTTTC
AAGCCCGAGA CCAAGGTCGA TCCCGACTTC GCGCAGCGCC TCGCGCGCAA CGGCCTCGCG
GGCGAGATCG ACAGCAGCAC GGGCAAGTGG ATCATTCGGA GCCGGTCATG A
 
Protein sequence
MPLQEWQWPE LPFALVDKSG HTQRAGRAAL ALLPQAATTV LVVAARDLLM LEQALPPLKG 
PKLKQALPNI IEDQLIQDPQ GCHIAVDPVA LDGGRRVLAV IDRAWFKFIV DAFAAAGHRH
LRAVPVTRCL PPATRRDTAE AAVEAVAMHE AAAGAPGDGH AAAEGASADT VALPEPIVAV
ALGLAATASA PSLAEESAAL LPETAAAPRV ELALARGALG EGFAAPVSTA VPTLEALANG
TPLELYELGE PGAEPQLASV RPLDDKRLLP GAAIWPFDAL VRRALDARFD LCQFEFEFAP
WRFDHATFMR LRVPLALAAA TLVVAVIGVN AHWWKLSRER DALAAQITET LLTAFPKTTT
VLDPAAQMTR QLDRLRIAAG ELSPNDFLSL ASRLARSLGP LPPNGIASLD YHDRRLDVGF
KPETKVDPDF AQRLARNGLA GEIDSSTGKW IIRSRS