| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0015 |
|---|
| Symbol | gspK |
|---|
| ID | 3848363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 16144 |
|---|
| End bp | 17397 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637839688 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_440575 |
|---|
| Protein GI | 83718959 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTT CCGCCCTCCT CGTTCGCCTC GCTTCGCTTC GCCGCCGGCG CGTGCCGCAC
GATCAGCATG CGCCGGGCGC GGCGCGTTCG GCGTCGGCGC GTTTGCCGTG CGCGCCGCGC
AGCAGCGGCA GCGCCGCCGC CGATTTCCGC GCGGGCCCGC TCGCGCGCCG GCCGCGAGCG
CCCGCGCATC GCGAGCGGGG CGTCGCGATC ATCAGCGCGC TGCTCGTCGT CGCGCTGTCG
GCGATCCTCG TCGCCGGGAT GCTCTGGCGC CAGCAGGTGC AGGTGCGCCG GATCGAGAAC
CAGCGGCTGC TCGCGCAGGC GCAGTGGATT GCGCGCGGCG CGCTCGACTG GACGCGGATG
GTGCTGCGCT CCGAAGGCGA TACGGCGCCG GGCATCACCT ATCTCGGCGG GATCTGGGCG
GTGCCGATCG CGAAGACGAA GCTGTCCGAC TTTCTCGGCC GCATCGGTGC GGCCGACGCG
GCCGAAGGCG CGGATACCTA TCTGTCCGGC TCGATCGAGG ACGCGCAGGC GAAGTTCAAT
CTGCGCGATC TCGTGTCGTC GCCCGCGCCG GGCGCGCTGC AATTGAACGC CGCGCAGGTG
CAGACGTTTC AGCGGCTGCT CGCGACGCTC GGGCTCGACC AGCAACTCGC GAAGATCGTC
GCGCGACGCG TGCGCGCGGG GCTCAGGCAG TCGGCGACGC GTTTCCAGGC GGCCCAGCTG
CCGGGCGTCG CGAGCGGCGT GCCCGTTCCG CTGCCGGACG GCGGCACCGA GAGCGGCGGC
AATTTCACCG ACGAGCCGGG CATCGCGGGC GGCGAAGGCC GTGGGCCCGC GCCGCTGATG
ATGACGAGCG TCGATTCGCT GCTCGACGTC GAGGGTTTCA CGCCGGAGAT GGTCGAGCGG
CTGCGCCCGT TCGTCACCGT GCTGCCGACG GTGACGCCCG TCAATCTGAA CACCGCGCCC
GCCGAGGTGA TCGCGGCGCT CGTGCCGGGG ATGTCCGTTT CGTCCGCGCA GGCGCTCGTG
TCGCGGCGCG AGACCGTGTT TTTTCGCAAC GTCGGCGACG TGACGCTCGC GCTGCGCGGC
GCCGGCGCGC CGAACGTGAA CCTCGATTCG AGCCAGATCG ACGTCACTTC CAGCTATTTC
ATCGTGCATG GCCGGATCGA GCACGACCGG GCAGTCGTGG ATCGCACGTC GCTCGTGTAT
CGTGATCCGA CCACGCACAC GACGCGCATC GTGCGCATTC GCGATCAGCT ATAA
|
|---|
| Protein sequence | MRASALLVRL ASLRRRRVPH DQHAPGAARS ASARLPCAPR SSGSAAADFR AGPLARRPRA
PAHRERGVAI ISALLVVALS AILVAGMLWR QQVQVRRIEN QRLLAQAQWI ARGALDWTRM
VLRSEGDTAP GITYLGGIWA VPIAKTKLSD FLGRIGAADA AEGADTYLSG SIEDAQAKFN
LRDLVSSPAP GALQLNAAQV QTFQRLLATL GLDQQLAKIV ARRVRAGLRQ SATRFQAAQL
PGVASGVPVP LPDGGTESGG NFTDEPGIAG GEGRGPAPLM MTSVDSLLDV EGFTPEMVER
LRPFVTVLPT VTPVNLNTAP AEVIAALVPG MSVSSAQALV SRRETVFFRN VGDVTLALRG
AGAPNVNLDS SQIDVTSSYF IVHGRIEHDR AVVDRTSLVY RDPTTHTTRI VRIRDQL
|
|---|
| |