Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0007 |
Symbol | |
ID | 3847509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 8351 |
End bp | 10585 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637839680 |
Product | general secretion pathway protein D |
Protein accession | YP_440567 |
Protein GI | 83720377 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGCGCG TCGCAACGGC GCTCGTCGTC GCCGGAATTG TCGCCGCGCA GGCCGCTCAC GCTCAGGTCA CGCTCAATTT CGTCAATGCG GACATCGACC AGGTCGCGAA GGCGATCGGC GCCGCGACGG GCAAGACGAT CATCGTCGAT CCGCGCGTCA AGGGGCAGTT GAATCTCGTC GCCGAGCGCG CCGTGCCGGA AGATCAGGCA TTGAAGACGC TGCAGTCCGC GCTCCGGATG CAAGGTTTCG CGCTCGTCCA GGATCACGGC GTCCTGAAGG TCGTGCCGGA AGCCGACGCG AAGCTGCAGG GCGTGCCGAC CTACATCGGC AACACGCCGC AGGCGCATGG CGATCAGGTC GTCACGCAAG TGTTCGAACT GCGCAACGAG TCGGCGAACA ACTTGCTTCC GGTGCTGCGC CCGCTGATCT CGCCGAACAA CACGATCACC GCGTATCCGG CCAACAACAC GATCGTCGTC ACCGATTACG CGGACAACGT GCGCCGGATC GCGCGGATCA TCGCGGGCGT CGACAACGCG GCAGGCGCGC AGGTTGCCGT CGTGCCGCTG AAGAACGCGA ACGCGATCGA CATCGCCGCG CAGCTCACGA AGCTGCTCGA CCCGGGCGCG ATCGGCAACA CCGACGCGAC GCTGAAAGTC ACCGTGCAGG CCGATCCGCG TACCAACGCG CTGCTTTTGC GCGCATCGAA CACGCAGCGC CTCGCCGCGG CGAAGAAGAT CGCGCAGCAG CTCGACGCGC CAAGCGGCGT GCCGGGCAAC ATGCATGTCG TGCCGTTGCG CAACGCCGAT GCGGTGAAGC TCGCGAAGAC GCTGCGCGGG ATGCTCGGCA AGGGCGGCGG CGAAAGCGGC TCGTCGGCGA GCTCGAACGA CGCGAATGCG TTCAATCAGG GCGGCTCGCA GAGCGGCTCG AATTTCTCGA CGGGCACTTC GGGCACGCCG CCGCTGCCGT CGGGGCTGTC GTCCGGCTCG TCGGGCGGCA TGGGCGGCAC GATGGGAGGC GGCGGGCTCG GTACCGCCGG CCTGCTGGGC GGCGACAAGG ACAAGAGCGA CGAGAATCAG CCGGGCGGCA TGATCCAGGC CGACTCGGCG ACGAATTCGC TCATCATCAC CGCGTCGGAC CCGGTGTACC GGAACCTGCG TGCGGTGATC GACCAGCTCG ATGCGCGGCG CGCGCAGGTG TACATCGAGG CGCTTGTCGT CGAGCTGAAC TCGACGACGA ACGCGAACCT CGGGATTCAG TGGCAGGTCG CCAACAACGC GCTCTATGCA GGCACGAACC TGCCGACGGG AGGCGTGGGC GGCGGCAACA GCATCGTCGA CCTGACAACC CGGGCCGCGA CGTCGGCCGT CGGTGCGATC AGCACGCTCA CGCCGGGGCT CAACATCGGC TGGTTGCACA ACATGTTCGG CATCCAGGGG CTCGGCGGGT TGCTGCAGTA TTTTTCCGGC GTGAGCGACG CGAACGTGCT GTCGACGCCG AACCTCGTGA CGCTCGACAA TGAGGAAGCG AAGATCGTCG TCGGCCAGAA CGTGCCGATT CCGACCGGCT CGTATTCGAA TCTGACGAGC GGCAACACGA ACAATGCGTT CAACACATAC GACCGGCGCG ATGTCGGCCT GACGCTGCAC GTGAAACCGC AGATCACCGA AGGCGGGATT CTGAAGCTGC AGCTGTACAC GGAGGACTCC TCGGTCGTGA ATACCACGGT CAACAACCAG TCCGGCCCGA CGTTCAACAA GCGCTCGATC CAGTCGACCG TGCTGGCCGA CAACGGCGAG ATCATCGTGC TCGGCGGCCT GATGCAGGAC AACTATCAGG TTTCGAACAG CAAGGTGCCG CTGCTCGGCG ACATTCCGTG GATCGGCCAG TTGTTCCGCT CCGAAGGCAA GACGCGCCAG AAGACGAACC TGATGGTGTT CCTGCGTCCC GTGATCATCA CCGATCGCGA GACCGCGCAG GCGGTGACCT CGAACCGCTA CGACTACATC CAGGGCGTGA CGGGCGCGTA CAAGTCGGAC AACAACATCA TCCGCGACAA GGACGACCCC GTCGTCCCGC CGATGCCGCT CGGCCCGAGC CAGGGCGGCT CGCCCGCGAT GAACCTGTTC GACATCGACA AGATGCGGCG CCAGCAGCTC GTTGCGCCCG CGCCCGCCAG CGCGCCCGCG GCGGCGAGCG ACGCCGGCGC CGCATCGTCG GGAGCCCGTC CGTGA
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Protein sequence | MRRVATALVV AGIVAAQAAH AQVTLNFVNA DIDQVAKAIG AATGKTIIVD PRVKGQLNLV AERAVPEDQA LKTLQSALRM QGFALVQDHG VLKVVPEADA KLQGVPTYIG NTPQAHGDQV VTQVFELRNE SANNLLPVLR PLISPNNTIT AYPANNTIVV TDYADNVRRI ARIIAGVDNA AGAQVAVVPL KNANAIDIAA QLTKLLDPGA IGNTDATLKV TVQADPRTNA LLLRASNTQR LAAAKKIAQQ LDAPSGVPGN MHVVPLRNAD AVKLAKTLRG MLGKGGGESG SSASSNDANA FNQGGSQSGS NFSTGTSGTP PLPSGLSSGS SGGMGGTMGG GGLGTAGLLG GDKDKSDENQ PGGMIQADSA TNSLIITASD PVYRNLRAVI DQLDARRAQV YIEALVVELN STTNANLGIQ WQVANNALYA GTNLPTGGVG GGNSIVDLTT RAATSAVGAI STLTPGLNIG WLHNMFGIQG LGGLLQYFSG VSDANVLSTP NLVTLDNEEA KIVVGQNVPI PTGSYSNLTS GNTNNAFNTY DRRDVGLTLH VKPQITEGGI LKLQLYTEDS SVVNTTVNNQ SGPTFNKRSI QSTVLADNGE IIVLGGLMQD NYQVSNSKVP LLGDIPWIGQ LFRSEGKTRQ KTNLMVFLRP VIITDRETAQ AVTSNRYDYI QGVTGAYKSD NNIIRDKDDP VVPPMPLGPS QGGSPAMNLF DIDKMRRQQL VAPAPASAPA AASDAGAASS GARP
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