Gene BTH_I0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0007 
Symbol 
ID3847509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp8351 
End bp10585 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content66% 
IMG OID637839680 
Productgeneral secretion pathway protein D 
Protein accessionYP_440567 
Protein GI83720377 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID[TIGR02517] general secretion pathway protein D 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCGCG TCGCAACGGC GCTCGTCGTC GCCGGAATTG TCGCCGCGCA GGCCGCTCAC 
GCTCAGGTCA CGCTCAATTT CGTCAATGCG GACATCGACC AGGTCGCGAA GGCGATCGGC
GCCGCGACGG GCAAGACGAT CATCGTCGAT CCGCGCGTCA AGGGGCAGTT GAATCTCGTC
GCCGAGCGCG CCGTGCCGGA AGATCAGGCA TTGAAGACGC TGCAGTCCGC GCTCCGGATG
CAAGGTTTCG CGCTCGTCCA GGATCACGGC GTCCTGAAGG TCGTGCCGGA AGCCGACGCG
AAGCTGCAGG GCGTGCCGAC CTACATCGGC AACACGCCGC AGGCGCATGG CGATCAGGTC
GTCACGCAAG TGTTCGAACT GCGCAACGAG TCGGCGAACA ACTTGCTTCC GGTGCTGCGC
CCGCTGATCT CGCCGAACAA CACGATCACC GCGTATCCGG CCAACAACAC GATCGTCGTC
ACCGATTACG CGGACAACGT GCGCCGGATC GCGCGGATCA TCGCGGGCGT CGACAACGCG
GCAGGCGCGC AGGTTGCCGT CGTGCCGCTG AAGAACGCGA ACGCGATCGA CATCGCCGCG
CAGCTCACGA AGCTGCTCGA CCCGGGCGCG ATCGGCAACA CCGACGCGAC GCTGAAAGTC
ACCGTGCAGG CCGATCCGCG TACCAACGCG CTGCTTTTGC GCGCATCGAA CACGCAGCGC
CTCGCCGCGG CGAAGAAGAT CGCGCAGCAG CTCGACGCGC CAAGCGGCGT GCCGGGCAAC
ATGCATGTCG TGCCGTTGCG CAACGCCGAT GCGGTGAAGC TCGCGAAGAC GCTGCGCGGG
ATGCTCGGCA AGGGCGGCGG CGAAAGCGGC TCGTCGGCGA GCTCGAACGA CGCGAATGCG
TTCAATCAGG GCGGCTCGCA GAGCGGCTCG AATTTCTCGA CGGGCACTTC GGGCACGCCG
CCGCTGCCGT CGGGGCTGTC GTCCGGCTCG TCGGGCGGCA TGGGCGGCAC GATGGGAGGC
GGCGGGCTCG GTACCGCCGG CCTGCTGGGC GGCGACAAGG ACAAGAGCGA CGAGAATCAG
CCGGGCGGCA TGATCCAGGC CGACTCGGCG ACGAATTCGC TCATCATCAC CGCGTCGGAC
CCGGTGTACC GGAACCTGCG TGCGGTGATC GACCAGCTCG ATGCGCGGCG CGCGCAGGTG
TACATCGAGG CGCTTGTCGT CGAGCTGAAC TCGACGACGA ACGCGAACCT CGGGATTCAG
TGGCAGGTCG CCAACAACGC GCTCTATGCA GGCACGAACC TGCCGACGGG AGGCGTGGGC
GGCGGCAACA GCATCGTCGA CCTGACAACC CGGGCCGCGA CGTCGGCCGT CGGTGCGATC
AGCACGCTCA CGCCGGGGCT CAACATCGGC TGGTTGCACA ACATGTTCGG CATCCAGGGG
CTCGGCGGGT TGCTGCAGTA TTTTTCCGGC GTGAGCGACG CGAACGTGCT GTCGACGCCG
AACCTCGTGA CGCTCGACAA TGAGGAAGCG AAGATCGTCG TCGGCCAGAA CGTGCCGATT
CCGACCGGCT CGTATTCGAA TCTGACGAGC GGCAACACGA ACAATGCGTT CAACACATAC
GACCGGCGCG ATGTCGGCCT GACGCTGCAC GTGAAACCGC AGATCACCGA AGGCGGGATT
CTGAAGCTGC AGCTGTACAC GGAGGACTCC TCGGTCGTGA ATACCACGGT CAACAACCAG
TCCGGCCCGA CGTTCAACAA GCGCTCGATC CAGTCGACCG TGCTGGCCGA CAACGGCGAG
ATCATCGTGC TCGGCGGCCT GATGCAGGAC AACTATCAGG TTTCGAACAG CAAGGTGCCG
CTGCTCGGCG ACATTCCGTG GATCGGCCAG TTGTTCCGCT CCGAAGGCAA GACGCGCCAG
AAGACGAACC TGATGGTGTT CCTGCGTCCC GTGATCATCA CCGATCGCGA GACCGCGCAG
GCGGTGACCT CGAACCGCTA CGACTACATC CAGGGCGTGA CGGGCGCGTA CAAGTCGGAC
AACAACATCA TCCGCGACAA GGACGACCCC GTCGTCCCGC CGATGCCGCT CGGCCCGAGC
CAGGGCGGCT CGCCCGCGAT GAACCTGTTC GACATCGACA AGATGCGGCG CCAGCAGCTC
GTTGCGCCCG CGCCCGCCAG CGCGCCCGCG GCGGCGAGCG ACGCCGGCGC CGCATCGTCG
GGAGCCCGTC CGTGA
 
Protein sequence
MRRVATALVV AGIVAAQAAH AQVTLNFVNA DIDQVAKAIG AATGKTIIVD PRVKGQLNLV 
AERAVPEDQA LKTLQSALRM QGFALVQDHG VLKVVPEADA KLQGVPTYIG NTPQAHGDQV
VTQVFELRNE SANNLLPVLR PLISPNNTIT AYPANNTIVV TDYADNVRRI ARIIAGVDNA
AGAQVAVVPL KNANAIDIAA QLTKLLDPGA IGNTDATLKV TVQADPRTNA LLLRASNTQR
LAAAKKIAQQ LDAPSGVPGN MHVVPLRNAD AVKLAKTLRG MLGKGGGESG SSASSNDANA
FNQGGSQSGS NFSTGTSGTP PLPSGLSSGS SGGMGGTMGG GGLGTAGLLG GDKDKSDENQ
PGGMIQADSA TNSLIITASD PVYRNLRAVI DQLDARRAQV YIEALVVELN STTNANLGIQ
WQVANNALYA GTNLPTGGVG GGNSIVDLTT RAATSAVGAI STLTPGLNIG WLHNMFGIQG
LGGLLQYFSG VSDANVLSTP NLVTLDNEEA KIVVGQNVPI PTGSYSNLTS GNTNNAFNTY
DRRDVGLTLH VKPQITEGGI LKLQLYTEDS SVVNTTVNNQ SGPTFNKRSI QSTVLADNGE
IIVLGGLMQD NYQVSNSKVP LLGDIPWIGQ LFRSEGKTRQ KTNLMVFLRP VIITDRETAQ
AVTSNRYDYI QGVTGAYKSD NNIIRDKDDP VVPPMPLGPS QGGSPAMNLF DIDKMRRQQL
VAPAPASAPA AASDAGAASS GARP