| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2363 |
|---|
| Symbol | |
|---|
| ID | 3844572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2900819 |
|---|
| End bp | 2901754 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637839663 |
|---|
| Product | GGDEF domain-containing protein |
|---|
| Protein accession | YP_440550 |
|---|
| Protein GI | 83718387 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.282615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC TTTCCTCGCT GAGCGATCTC GTCATCGAAC GGGTCAGCTT CGGCATTTTC
GTGCTCGACC GCGAGATGAG GGTACTCATG TGGAACCGGT TCATGCAAGA CCACAGCGGC
GTTGCGGCCG CCGACGTGAT CGGCCGCAAT CTGTTCGACA GTTTTCCGGA TCTGCCGCGC
GCTTGGCTGT CGCGCAAGAT CGAGAGCGTG TTCCAGCTCG GCGGCTTCGC GTTCAGCTCG
TGGGAGCAGC GCCCGTATCT GTTCCGCTTC GATCATGACC GGCCGATCAC GGGCGGCGTT
GACTTCATGC AGCAGGACTG CACGTTCGTG CCGATCGCGC GGGCACGCGA AGTGGAGGCC
GTCTGCGTGA CGATCTCCGA TGTCACGCAC GTGAGCGTGA TGCAGCGCGA GCGCGAGGAG
GCCGTGGCGA AACTGCAGGA ATACGCGAAC CGCGACGGCC TGACGGGCAT CGCGAACCGG
CGCTTCTTCG AGGCGCGGCT GCGCGATGAA TTCTCCCGCT GGCAGCGCTA CGGCGGCAAT
CTGTCGGTGC TGCTGTTCGA TCTCGACCAC TTCAAGGCGA TCAACGATCG CTTCGGCCAT
GTCGTCGGAG ACAACGTGCT GCGCGTGATG GCGCAGCGCG TCGCGGACGT CGTGCGCACG
CAGGACACGT TCGGCCGCTT CGGCGGCGAG GAATTCGCGC TGCTGCTGCC GTGCACGTCG
CTCGACGAGG CGATGCACGT CGCCGAGAAG ATCAGGCAGA CGATCGGCAA CACGCCGATC
GAAGCGGAAG GCGTGCGGGT GCCGGTGACG GCGAGCGTCG GCGGCGCGGC CGCGCACGTC
GGCGCGCTCA CGCACGAGAC GCTCGTCAAC GAAGCCGATG CCGCGCTTTA TCGCGCGAAG
CGGCAGGGGC GGAACTGCTC GGTCGCGTTC GGCTGA
|
|---|
| Protein sequence | MNLLSSLSDL VIERVSFGIF VLDREMRVLM WNRFMQDHSG VAAADVIGRN LFDSFPDLPR
AWLSRKIESV FQLGGFAFSS WEQRPYLFRF DHDRPITGGV DFMQQDCTFV PIARAREVEA
VCVTISDVTH VSVMQREREE AVAKLQEYAN RDGLTGIANR RFFEARLRDE FSRWQRYGGN
LSVLLFDLDH FKAINDRFGH VVGDNVLRVM AQRVADVVRT QDTFGRFGGE EFALLLPCTS
LDEAMHVAEK IRQTIGNTPI EAEGVRVPVT ASVGGAAAHV GALTHETLVN EADAALYRAK
RQGRNCSVAF G
|
|---|
| |