| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2338 |
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| Symbol | |
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| ID | 3846109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2862202 |
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| End bp | 2864604 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637839638 |
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| Product | sensory box protein |
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| Protein accession | YP_440525 |
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| Protein GI | 83718235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGACA GGGGCGGCAA GGCGGCCGAA CTGAGGCCGG CGCTCGACGT CTGGCCGATC
CTGCTGATGG TGTCGGTGCT CGTGTGCGTC GTGATCGTGA GTCTTGCCGT GGTGTCGTTC
CTCAGGGTCT ACATCGGCGG CGAGAGCACG TGGTCGAAAT CGCAGAAGGA TGCGGTCATC
TACCTGATCC GCTACGCGGA GACGGGCGAC GAGCGCGCGT ACAAGCTCTA TGAGGCCGCG
ATCGACAAGC CGTATCGCCT GAGCCTCGCG CGCACCGCGT TGCAGCGCCA GCCACCCGAT
CGCGCGACCG CGCGCGAGGC GATCATCGCG AGCGGCATCG ATCCGACCGA CGCGACGGCG
GCCGCGCTGC TGCTGCCCGC CCTCAGCTGG GTCGCGAAGA TCAACTATGC GCTGCGGTGC
TGGATGCAGG CGGATGTCGA GCTCGCCGAG TTCCGCAACG TCGCGAGCCA GCTGCACGCG
CTCGTCAGCA GCGGCCGGCG CGACGATCCG CGCGTGACGG CGCTTGAAAA CCGCGCGTGG
GAAATCAACG AGCGCGTGTC CGGCCTGCCC GATCGCTTCT CGAAGGCGTT CAGCGACGAA
TTCCGCTCGA GCGTCGCGCT GCTGCTCGTC TGCTACTTCG TCGCGTCGAT GTTCCTGATG
TACCTCGCGC TCGTCTGGGC GCGCAGGGCC GCGCTGCAAC GGCTGTCGAT CCAGTACGCG
CTCGATCGCA GCGAGGCGTT CGCCGAGGCG GCGCTGAGCT CGGTCGCGGA GGCGGTGATC
ACGGTCGGGC TCGCGAAGAA CGTCGACTTC ATCAATAACG CGGCCGAGCA GCTGCTCGGC
TATTCGGCCG CCGCGTGCGT CGGCGCGCCG GTGTCGAGCG TGCTGATGCT GCTCGACAAG
GAGACCGGGC ACGCGGTCGA CATCGTCGAC GAATTCTGGG CGCGCGACGA GCGCACGCCG
ATCAAGCGCG AAGTGCATTT GCTGCGCCGC GATCATTCGA AGATCGTTGT GCAGACAACG
ATTTCGGAGA TGGGCGACCG CGTGCACGGC CACATCGGCT ACGTGCTGAT CCTGCGCAAC
ATGACGCGCG AGCAGCAATT TCTCGAAAGC CTCGCGTGGC AGGCGACGCA CGACGTGCTG
ACGGGGCTCG TGAATCGCGT CGAGTTCGAG CGCCGCCTCG AGATCGCGCT CGCCGATACG
ACCTCCAGCA AGGATCGCGC GGATTCGATG CTGCTGATGC TCGATCTCGA CCGCTTCAAG
GAGATCAACG ACACCTGCGG CCACGCGGCG GGCGACGCGA TGCTGCGCGA AGTCACGCAG
CGCTTTCAGA GCTGCCTCGA CGACGACGAC GTGCTCGCGC GGCTTGGCGG CGACGAGTTC
GGCGTGCTGC TGCCGCACGG CGCGGGCTCG TGGCCTTCGA AGAACAAGGC GGAACGGCTG
CGCCGCAGCC TCGAGGATTT CGTGTTCCTG TGGGAAGGCG AGCGCTTCAC GGTCAGCGTC
AGTATTGGCG TGCTCGAGCT TTGCAAGGCG CCGCGCAATC TCGAGATGGC CGTCAAGCTC
GCCGACATCG CGTGCTACAT CGCGAAGGAG CGCGGGCGCA ACCGCATCCA GCTCGCGGAC
CCGAGCGACC TGCAGCAGGC GCGCCACGTC GGCGACGTGC AGTGGAGCCG CCGGATCAAG
ACCGCGCTCG AAACAGACGG CTTTCGCCTG TACGTGCAGC CGATCGTCCA CACGCGCCCG
GATTCGCGCA CGCCCGAGCG CGCGGAGGTG CTGCTGCGGA TGACGGACAG CGCGGGCCGC
GACATCTCGC CCGCCGCGTT CCTGCCGGCC GCCGAGCGCT ACGGGCTGAT GGGGCTCATC
GACCGCTGGG TGATCCGCAC GGTGTTCCGC AAGCTGAGCG CGCTGCCCGC GCGCGAGTAC
CACGAGTACA ACGTGAACCT GTCGGGCGCG TCGATCTCCG ACGAACGCTT TCTCGAATTC
GTGATCGCCG AGCTGCTGAG CTCCGGTCTC GAACCTTCGG TGATCTGTTT CGAGATCACC
GAAACGATCG CCGTGAAGAA TCTCGAGCTC GCATCGCGCT TCATGGGCGA GTTGCGCGCG
ATCGGTTGCC GCTTCGCGCT CGACGATTTC GGCGCGGGCA TGTCGTCGTT TCGCTATCTG
CGCAGCTTGC CGATCGATTA TCTGAAGATC GACGGCGAGT TCGTGTCGAA CATGATGTCG
GACCGGGTGA GCTATGGCGT CGTCAGCGCG ATCAACGAAG TCGCGCATTC GATGCGTTGC
AGCACCGTCG CCGAGCATGT CGAGTCCGAG GTCGAGCTCG GGATGTTGCG CGAGCTCGGC
ATCGATTTCT GCCAGGGATA TTTCTTTGCT CAGCCTTCGC CGTGGCGCGA GGGCGGCTAT
TGA
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| Protein sequence | MNDRGGKAAE LRPALDVWPI LLMVSVLVCV VIVSLAVVSF LRVYIGGEST WSKSQKDAVI
YLIRYAETGD ERAYKLYEAA IDKPYRLSLA RTALQRQPPD RATAREAIIA SGIDPTDATA
AALLLPALSW VAKINYALRC WMQADVELAE FRNVASQLHA LVSSGRRDDP RVTALENRAW
EINERVSGLP DRFSKAFSDE FRSSVALLLV CYFVASMFLM YLALVWARRA ALQRLSIQYA
LDRSEAFAEA ALSSVAEAVI TVGLAKNVDF INNAAEQLLG YSAAACVGAP VSSVLMLLDK
ETGHAVDIVD EFWARDERTP IKREVHLLRR DHSKIVVQTT ISEMGDRVHG HIGYVLILRN
MTREQQFLES LAWQATHDVL TGLVNRVEFE RRLEIALADT TSSKDRADSM LLMLDLDRFK
EINDTCGHAA GDAMLREVTQ RFQSCLDDDD VLARLGGDEF GVLLPHGAGS WPSKNKAERL
RRSLEDFVFL WEGERFTVSV SIGVLELCKA PRNLEMAVKL ADIACYIAKE RGRNRIQLAD
PSDLQQARHV GDVQWSRRIK TALETDGFRL YVQPIVHTRP DSRTPERAEV LLRMTDSAGR
DISPAAFLPA AERYGLMGLI DRWVIRTVFR KLSALPAREY HEYNVNLSGA SISDERFLEF
VIAELLSSGL EPSVICFEIT ETIAVKNLEL ASRFMGELRA IGCRFALDDF GAGMSSFRYL
RSLPIDYLKI DGEFVSNMMS DRVSYGVVSA INEVAHSMRC STVAEHVESE VELGMLRELG
IDFCQGYFFA QPSPWREGGY
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