| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2312 |
|---|
| Symbol | |
|---|
| ID | 3846500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2834374 |
|---|
| End bp | 2835645 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637839612 |
|---|
| Product | intracellular polyhydroxyalkanoate depolymerase |
|---|
| Protein accession | YP_440499 |
|---|
| Protein GI | 83717460 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
|---|
| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTACG CGTGGCTCGA AGCGCAACGT GAGTTCTTCC GCGCATGCCA GCCGTGGACG
GGCGCCGCGC AGCGCGCGAA CGCGAGCGCG CGCTCGGCCG GCTGGCCGAC ATGGGGCCCG
ATGGCGCACG CGGCCGATGC GATCCCCAAG CCGCCGCCGT TCGCGATCGC GTCGGTCATG
ATCGACGGCG CGGCCGTCCC GGTCGACGAA CGGGTCGTCG ACGACACGCC GTTCTGCGCG
CTGCGCAAGT TCTCCCGCCG GCTCGACGGC GGCGCGGCCG CGCGCCCAGC GGTCTTTCTG
TGCACGCCGC TCGCCGGCCA CCATGCGGTG ATGCTGCGCG AGACCGTCGA GACGATGCTC
GCGACGCGCG ACGTCTACGT GACCGACTGG CGCAACGCGC GCGACGTCCC GCCCGACGCG
GGCGCGTTCG GCCTCGACGA CTACGTGTGC ACGCTCGAAC GCTTCATCGC CGGCGCGGCC
GAAAGCGGGC TGCACGTGAT GGCGGTCTGC CAGGCGACGG TGCCCGCGCT CGCGGCCGCC
GCGCTGCTTG CGGCGCGCGG CGTCCACGTC GCGAGCGTCG CGCTGCTCGG CGGCCCGATC
GACACGCGCT CGCACCCGAC GCTCGTCGAC CGCTTCGCGC TCGAACACGA CCTCGACTGG
TTCCGCTGCG CGGCGATCGA CGTCGTGCCG CCGCCGTATG CGGGCGCGGG GCGGCGCGTC
TATCCGGGCT TCATCCAGCA CGCGGCGATC GTCGTCGCAC ATCCGCAGCG GCGCGTGTCG
CTCGAGAGCC GCTACTGGGC CGCGTGGATG ACGGGCGATC TCGCGTGCGC CGCGCGCTGC
ATGCGCGAGA TGAACGAATA CGGCGCGGTG CTCGACATGA CCGAGCGCTA TTTCCTCGAC
ACGATTCGCG TGATCTTCCA CGAGCGGCTG CTCGCGCAAG GCCGCTGGTC GATCGGCAGC
CGCCGCGTCG CGCCGGAGCA ACTCACGCGC ACCGCGCTCT GCACGATCGA AGGCGGCCGC
GACGACATTG CCGGCGCCGG CCAGACGCAC GCGGCGCACG CACTATGCAA CGCGGTGCCC
GACGCCGGGC GCGAGCGCAT CACCGAGCCG GACTGCGATC ACTACGACCT CTTTCTCGGC
CCGCGCTGGC GGCACTCGAT CCATCCGGCG CTCGACGCGT TCTGGACGCG CGCGGAAGCG
GCGCGGCGCG CGGCCGGCGA GCCGCCTCGC GCCGCGCCGA GCGCCGAGCC CGAGCACCGA
ATCGCGCATT GA
|
|---|
| Protein sequence | MLYAWLEAQR EFFRACQPWT GAAQRANASA RSAGWPTWGP MAHAADAIPK PPPFAIASVM
IDGAAVPVDE RVVDDTPFCA LRKFSRRLDG GAAARPAVFL CTPLAGHHAV MLRETVETML
ATRDVYVTDW RNARDVPPDA GAFGLDDYVC TLERFIAGAA ESGLHVMAVC QATVPALAAA
ALLAARGVHV ASVALLGGPI DTRSHPTLVD RFALEHDLDW FRCAAIDVVP PPYAGAGRRV
YPGFIQHAAI VVAHPQRRVS LESRYWAAWM TGDLACAARC MREMNEYGAV LDMTERYFLD
TIRVIFHERL LAQGRWSIGS RRVAPEQLTR TALCTIEGGR DDIAGAGQTH AAHALCNAVP
DAGRERITEP DCDHYDLFLG PRWRHSIHPA LDAFWTRAEA ARRAAGEPPR AAPSAEPEHR
IAH
|
|---|
| |