Gene BTH_II2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II2274 
Symbol 
ID3845870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2787168 
End bp2788535 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID637839575 
Producttype II secretion system protein 
Protein accessionYP_440462 
Protein GI83716156 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTGC GAGACCAGAT GTCCGCGCGG CGCGTGCAGC CGCTCATGTC CCGAAGCGAC 
GCCGTCGGCG CGGCGACGGC GATGGCGCGC GAGGCATATC AGAAGCTGCG CCGCCAGATG
CACGGCGCGG TGCTCGAGCG CGTCGAGCTC GAGCGCCTGT CGCGGCTGCC CGCCGAGCAG
GTGCGAAACG AGATCGCGTC GCTGATCGCG CGCATTCTCG ACGAAGAGAA GCTGCTCGCG
AACGATCTCG AACGCCGCCA GCTGACCGTC GACATCTACG ACGAAATGTT CGGCTTCGGC
CCGCTCGAAT CGCTGCTGCG CGACCCGACC GTGTCGGACA TCCTCGTCAA CACGGCGAGC
GCCGTCTACG TCGAGCGGTA CGGCCGGCTC GAGCTGACCG ACGTCACGTT CTACGACGAC
GCGCACCTGA TGAAGGTGAT CGAGAAGATC GTGTCGCGCG TCGGCCGGCG CATCGACGAA
TCGAGCCCGA TGGTCGACGC GCGCCTGCCC GACGGCTCGC GCGTGAACGC GATCATCCCG
CCGTCCGCGA TCGACGGCCC GCTGATGTCG ATTCGCCGCT TCGCGGTCAA TCCGCTGAAG
ATGGACGACC TCGTCAACTA CCAGACGCTG ACGCCGCCGA TGGCGCAGCT GCTCGAGGCG
CTCGCGCGCG CGAAGGTCAA CGTGCTCGTG TCGGGCGGCA CCGGCAGCGG CAAGACGACG
CTGCTGAACA TCCTGTCCGG CTTCATTCCG GACGACGAAC GGATCGTGAC GATCGAGGAC
GCGGCGGAGC TGCAGTTGCA GCAGCATCAC GTGCTGCGGC TCGAGACGCG CCCGCCGAAC
ATCGAGGGCA AGGGCGAGAT CACGCAGCGC ACGCTCGTGC GCAACGCGCT GCGCATGCGC
CCCGACCGCA TCATCCTCGG CGAAGTGCGC GGCGCCGAGG CGCTCGACAT GCTGAACGCG
ATGAACACCG GCCACGAAGG CTCGCTCGCG ACGATCCACG CGAACACCCC GCGCGACGCG
CTGACGCGGC TCGAGAACAT GATCGGCGTC TCGGGCCTCA CGCTGCCGCC GAAGACGATG
CGCCAGCAGA TCAGCTCGGC GATCGCCGTC GTCGTGCAGA CGTCGCGGCT CACGGACGGC
AAGCGCAAGA TCGTCAGCAT CCAGGAGCTG ACCGGCATGG AGGGCGAGAT CATCAACATG
CAGGAGATCT TCATGTTCAA GCGCACCGGC CTCGACGCGA ACGGCAACGT GCTCGGCTAC
TTCACCGCGA CGGGCGTGCG GCCGAAGTTC ACCGAGCGTC TGAACGCGTT CGGCATCCAG
CTGCCCGACG CGATGTACGA TCCCGCGCGC CGCTTCGAAG TGGCGTAA
 
Protein sequence
MSLRDQMSAR RVQPLMSRSD AVGAATAMAR EAYQKLRRQM HGAVLERVEL ERLSRLPAEQ 
VRNEIASLIA RILDEEKLLA NDLERRQLTV DIYDEMFGFG PLESLLRDPT VSDILVNTAS
AVYVERYGRL ELTDVTFYDD AHLMKVIEKI VSRVGRRIDE SSPMVDARLP DGSRVNAIIP
PSAIDGPLMS IRRFAVNPLK MDDLVNYQTL TPPMAQLLEA LARAKVNVLV SGGTGSGKTT
LLNILSGFIP DDERIVTIED AAELQLQQHH VLRLETRPPN IEGKGEITQR TLVRNALRMR
PDRIILGEVR GAEALDMLNA MNTGHEGSLA TIHANTPRDA LTRLENMIGV SGLTLPPKTM
RQQISSAIAV VVQTSRLTDG KRKIVSIQEL TGMEGEIINM QEIFMFKRTG LDANGNVLGY
FTATGVRPKF TERLNAFGIQ LPDAMYDPAR RFEVA