Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2274 |
Symbol | |
ID | 3845870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 2787168 |
End bp | 2788535 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637839575 |
Product | type II secretion system protein |
Protein accession | YP_440462 |
Protein GI | 83716156 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATTGC GAGACCAGAT GTCCGCGCGG CGCGTGCAGC CGCTCATGTC CCGAAGCGAC GCCGTCGGCG CGGCGACGGC GATGGCGCGC GAGGCATATC AGAAGCTGCG CCGCCAGATG CACGGCGCGG TGCTCGAGCG CGTCGAGCTC GAGCGCCTGT CGCGGCTGCC CGCCGAGCAG GTGCGAAACG AGATCGCGTC GCTGATCGCG CGCATTCTCG ACGAAGAGAA GCTGCTCGCG AACGATCTCG AACGCCGCCA GCTGACCGTC GACATCTACG ACGAAATGTT CGGCTTCGGC CCGCTCGAAT CGCTGCTGCG CGACCCGACC GTGTCGGACA TCCTCGTCAA CACGGCGAGC GCCGTCTACG TCGAGCGGTA CGGCCGGCTC GAGCTGACCG ACGTCACGTT CTACGACGAC GCGCACCTGA TGAAGGTGAT CGAGAAGATC GTGTCGCGCG TCGGCCGGCG CATCGACGAA TCGAGCCCGA TGGTCGACGC GCGCCTGCCC GACGGCTCGC GCGTGAACGC GATCATCCCG CCGTCCGCGA TCGACGGCCC GCTGATGTCG ATTCGCCGCT TCGCGGTCAA TCCGCTGAAG ATGGACGACC TCGTCAACTA CCAGACGCTG ACGCCGCCGA TGGCGCAGCT GCTCGAGGCG CTCGCGCGCG CGAAGGTCAA CGTGCTCGTG TCGGGCGGCA CCGGCAGCGG CAAGACGACG CTGCTGAACA TCCTGTCCGG CTTCATTCCG GACGACGAAC GGATCGTGAC GATCGAGGAC GCGGCGGAGC TGCAGTTGCA GCAGCATCAC GTGCTGCGGC TCGAGACGCG CCCGCCGAAC ATCGAGGGCA AGGGCGAGAT CACGCAGCGC ACGCTCGTGC GCAACGCGCT GCGCATGCGC CCCGACCGCA TCATCCTCGG CGAAGTGCGC GGCGCCGAGG CGCTCGACAT GCTGAACGCG ATGAACACCG GCCACGAAGG CTCGCTCGCG ACGATCCACG CGAACACCCC GCGCGACGCG CTGACGCGGC TCGAGAACAT GATCGGCGTC TCGGGCCTCA CGCTGCCGCC GAAGACGATG CGCCAGCAGA TCAGCTCGGC GATCGCCGTC GTCGTGCAGA CGTCGCGGCT CACGGACGGC AAGCGCAAGA TCGTCAGCAT CCAGGAGCTG ACCGGCATGG AGGGCGAGAT CATCAACATG CAGGAGATCT TCATGTTCAA GCGCACCGGC CTCGACGCGA ACGGCAACGT GCTCGGCTAC TTCACCGCGA CGGGCGTGCG GCCGAAGTTC ACCGAGCGTC TGAACGCGTT CGGCATCCAG CTGCCCGACG CGATGTACGA TCCCGCGCGC CGCTTCGAAG TGGCGTAA
|
Protein sequence | MSLRDQMSAR RVQPLMSRSD AVGAATAMAR EAYQKLRRQM HGAVLERVEL ERLSRLPAEQ VRNEIASLIA RILDEEKLLA NDLERRQLTV DIYDEMFGFG PLESLLRDPT VSDILVNTAS AVYVERYGRL ELTDVTFYDD AHLMKVIEKI VSRVGRRIDE SSPMVDARLP DGSRVNAIIP PSAIDGPLMS IRRFAVNPLK MDDLVNYQTL TPPMAQLLEA LARAKVNVLV SGGTGSGKTT LLNILSGFIP DDERIVTIED AAELQLQQHH VLRLETRPPN IEGKGEITQR TLVRNALRMR PDRIILGEVR GAEALDMLNA MNTGHEGSLA TIHANTPRDA LTRLENMIGV SGLTLPPKTM RQQISSAIAV VVQTSRLTDG KRKIVSIQEL TGMEGEIINM QEIFMFKRTG LDANGNVLGY FTATGVRPKF TERLNAFGIQ LPDAMYDPAR RFEVA
|
| |