Gene BTH_II2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II2210 
Symbol 
ID3844846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2713278 
End bp2714765 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content70% 
IMG OID637839511 
Productsigma-54 dependent DNA-binding transcriptional regulator 
Protein accessionYP_440398 
Protein GI83717957 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000404339 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGGC GCGCGGCGGA GTCCCTGTTC AAGACCTTCG AGCATTCGAG CGTCGGCACG 
CTGATCGTCG ACAAGGATGC GCGCGTCGTC TGGATCAATC AGCGCTATGC GGCGCGCTTC
GGGTTCGCCG ATCCGCAGCA GGCGATCGGC CGCGATTGCG AAGCGGTGAT TCCGCACAGC
CTGATGCGCG AGGTGGTCGC GACCGGCCGC CCGATACTGC TCGACATCAT GGAGACGGGC
CGCGAGCCGC TCATCGTCAC GCGCCTGCCG CTGACGGACG ACGCGGGCGA GACCGTCGGC
GCGATCGGCT TCGCGCTGTT CGACGAGTTG AAGACGCTGA CGCCGCTCTT TTCCCGCTAC
ATGCAGGTCC AGCAGGAGCT GATCGCGACG CAGCGCTCGC TTGCGCAGGC GCGGCGGGCG
AAATACACGT TCGCGAGCTT TGTCGGCACG AGTGCGGTGA GCCTCGAGAC GAAGCGGCAG
GGGCGGCGCG CCGCGCAGGT CGATTCGCCC GTGCTGCTGC TCGGCGAGAC GGGCACCGGC
AAGGAGTTGC TCGCGCACGC GATTCATGCG GCGTCCGCGC GTGCGCTCAA GCCGCTCGTG
ACCGTCAACG TCGCGGCGAT TCCCGATGCG CTGCTCGAAA CCGAGTTCTT CGGCGCGGCG
CCGGGCGCGT ACACGGGCGC GGATCGCAAG GGGCGCGTCG GCAAGTTCGA GCTTGCCGAC
GGCGGCACGC TCTTTCTCGA CGAAATCGGC GACATGCCGC TGCCGCTGCA GGGCAAGCTG
CTGCGCGTGC TGCAGGACAA GGAGTTCGAG CCCGTCGGCT CGAACCGGAT CGTGCGCGCG
AACGTGCGGA TCATCGCGGC GACGTCGGCC GAGCTGCCGG CGCTCGTTGC GCAAGGGCGC
TTTCGCGCGG ATCTCTATTA CCGGCTGAAC GTGCTGACGA TCCATGCGCC GCCGTTGCGC
GAGCGCGCAT CGGACATCGA GGCGCTCGTC TACACGATGC TCGAGGAACT CGCCGCACAG
CACGGACTTG CCGAACACTG CGAACTGACC GACGACGCGC TGCGCCTGCT GTGCGCCCAT
CCGTGGCCCG GCAACGTGCG CGAACTGCGC AACACGCTCG AGCGTGCGCT GATGCTCTCC
GATCGCGCGT TGATCGATGC GCGCGCGCTC GCGCCGTTCA TTGGGCCGGC GCATGGAGCG
GGGGCGGGTT CCGGCGTTGA GGCGGGCACA GCAGCCGGCG CAGCCGCAGC GGGGGCGATG
GATGGTGCGG GCGGCTCCGG CCTGGCCGCG GTCGCGGCGT CGGCGGCCGC GCCTGACATG
CGCGCGGCGG CTTCATCGTA TGCGGACGCG TTCGCCGCAT GGGAGCGCCA GTTCCTGCTC
GACGCGCTTG CCGCGTCCGG CGGCAAGGTG ACGGACGCGG CCGCGTGCAT CGGCATCGGG
CGCGCTACGT TCTACAAGAA GCTCGCGTCG CTCGGCATCG ATACGTAA
 
Protein sequence
MLRRAAESLF KTFEHSSVGT LIVDKDARVV WINQRYAARF GFADPQQAIG RDCEAVIPHS 
LMREVVATGR PILLDIMETG REPLIVTRLP LTDDAGETVG AIGFALFDEL KTLTPLFSRY
MQVQQELIAT QRSLAQARRA KYTFASFVGT SAVSLETKRQ GRRAAQVDSP VLLLGETGTG
KELLAHAIHA ASARALKPLV TVNVAAIPDA LLETEFFGAA PGAYTGADRK GRVGKFELAD
GGTLFLDEIG DMPLPLQGKL LRVLQDKEFE PVGSNRIVRA NVRIIAATSA ELPALVAQGR
FRADLYYRLN VLTIHAPPLR ERASDIEALV YTMLEELAAQ HGLAEHCELT DDALRLLCAH
PWPGNVRELR NTLERALMLS DRALIDARAL APFIGPAHGA GAGSGVEAGT AAGAAAAGAM
DGAGGSGLAA VAASAAAPDM RAAASSYADA FAAWERQFLL DALAASGGKV TDAAACIGIG
RATFYKKLAS LGIDT