| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2139 |
|---|
| Symbol | |
|---|
| ID | 3844711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2626527 |
|---|
| End bp | 2628827 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637839440 |
|---|
| Product | TonB-dependent heme/hemoglobin receptor family protein |
|---|
| Protein accession | YP_440327 |
|---|
| Protein GI | 83717803 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATCAAC CTCTGCTGGC GCGGCGGCCG CTTCGCGCCG CGCTGTTCGG GGCCTTCGGC
CTCTACGCGG CGGCCGCGCG CGCCGCGGGC GCCGCCTCCG AACCCGCGGC CGCCGCGCCG
CCGTCCGCCG CGTCCGCACC GCAAGTGCGA CACGCGGCGA GCGCGGCCAC ACGCGGCAAC
GCGCGCGCCC TCGACCCGAT CACCGTCACC GCGACGCGCA CCGCGTCGGC CGCGAGCCGC
ACCGCGGCGA GCGTATCGGT AATCACCGAT TCGGACCTCG AAGAACAGCA GGCCGACAAC
ATCAAGGACG CGCTGCGCTA CGAGCCGGGC GTCACCGTGC GGCGCACCGC GTACCGGCCG
GCGAACGCCG CGCTCGGCGG CGGCCGCGAC GGCGATTCGA GCATCAACAT CCGCGGCCTC
GAAGGCAACC GCGTGCTGCT GATGGAAGAC GGCATCCGGC TGCCGAGCGC GTTCTCGTTC
GGTCCGCTCG AAGCCGGCCG CGGCGATTAC GCCGATCTCG ACACGCTCAA GCGCATCGAG
ATCCTGCGCG GCCCGGCCTC GTCGCTGTAC GGCAGCGACG GCCTGACGGG CGCCGTCAAC
TTCATCACGA AAGATCCGTC CGATCTGCTG TCGATCCACG GGAAGAAGAC CTATTTCTCG
TTGCGGCCGA GCTACGACTC GGTCGACCGC AGCGTCGGCG CGGCCGTGGC GGCGGCGGGC
GGCAACGACC GCGTGCAGGG GATGCTGATC GCATCCGGCC GCCGAGGCCA CGAGGTCGAC
ACGCGCGGCG GCGACAATTC CGCGAGCACG AAGCGCACGA CCGCGAATCC CCAGGATGTC
TACACGGAAT CGCTGCTCGG CAAGCTGACG ATCACGCCGA CGCCACGCGA CACGTTCAAG
CTCACCGCCG AGACGGTGCG GCGCCGGATC GACACGAACG TACTGTCGGC GATCAATCCG
CCGACGACGC TCGGCCTCAC CGCGAACGAC AAGCTCGAGC GCAACCGCCT GAGCATCGAC
TACGATTTCC GCGACGACGC GTCACGCTGG TTCCAGACCG CGCACGTGCA GCTCTACTAC
CAGGAATCGA AACAGGATCA GGACGCGTTC GAGACGCGCG GCGGCCGCCT GCAATCGCGC
TCTCGCTCGA ACCATTACAG CGAGCGCGCG TTCGGCGGCT CCGCGTTCGC CGAGAGCGGC
TTCGCGACCG GGCCGCTCGC GCACAAGCTG CTGTACGGCG TCGACGGCAG CATCGACCGC
ATCAAGAGCC TGCGTGACGG CGCCGTCGCG AGCCCCGGCG AGTCGTTCCC GAACAAGGCG
TTTCCGGACA CCGACTACAC GCTGTTCGGC GCGTTCGTGC AGGACCAGAT CGGCTTCGGC
AAGCTGCTCG TCACGCCGGG CCTACGCTTC GACGCATATC GGCTGAGCCC GAGCGCGGGC
GATCCGCTCT TCACCGGCAA GACGGTCAGC TCGAGCGATC ACGAGCTGTC GCCGCGCCTC
GCGGTGCTGT ACGAGGTGAC GCCCGCGCTG ATCCCGTATG CGCAGTACGC GCACGGCTTT
CGCACGCCAA CGCCCGACCA GGTCAACAAC AGCTTCTCGA ATCCGATCTA TGGCTATACA
TCGATCGGCA ATCCGAACCT GAAGCCCGAG ACGAGCGACA CGCTCGAAGC GGGCCTGCGC
GGCACGCTCG GCACGGGGTA CGGGCCGCTG CGCTACGGCG TCGCCGCGTT CGCCGGCCGC
TATCGGAACT TCATCGCGCA GCGCATGATC GGCGGCAGCG GCCGGCCGAA CGATCCGCTC
GTGTTCCAGT ACGTGAACTT CACGAACGCG CGCATCCACG GCTTCGAAGG GCGCGCCGAG
TGGGTGATGC CCAACGGCTT CACGCTGAAG ACCGCGATGG CGTTCACGAA GGGCACGACG
CGGGACAACG GCGCGGCAAG CGAGCCGCTC GACACGGTCA ACCCGTTCTC CGCCGTGTTC
GGCGTGCGCT ACGAGCCGAG CGAGCGCTGG TTCGCGCAGG CCGACCTGCT GTTGCAGGCG
GGCAAGCGCG GCCGCGACGT GTCGTCGGCC GCGTGCCGGG AGAAGACGTG CTTCACGCCG
CCGTCGTCGT TCGTCGTCGA TCTGCGCGGC GGCTATCACT TCAACAAGCA CGTGAGCGCC
TACCTCGGCA TTCACAACCT GTTCGACCGC AAATACTGGA ACTGGTCGGA CGTGCGCGGC
ATCGCCGCCG ATTCGAACGT GCTCGACGCA TACACCGCTC CGGGCCGCAG CGTCGCGGTC
AGCATGAAGG TGGATTTCTG A
|
|---|
| Protein sequence | MHQPLLARRP LRAALFGAFG LYAAAARAAG AASEPAAAAP PSAASAPQVR HAASAATRGN
ARALDPITVT ATRTASAASR TAASVSVITD SDLEEQQADN IKDALRYEPG VTVRRTAYRP
ANAALGGGRD GDSSINIRGL EGNRVLLMED GIRLPSAFSF GPLEAGRGDY ADLDTLKRIE
ILRGPASSLY GSDGLTGAVN FITKDPSDLL SIHGKKTYFS LRPSYDSVDR SVGAAVAAAG
GNDRVQGMLI ASGRRGHEVD TRGGDNSAST KRTTANPQDV YTESLLGKLT ITPTPRDTFK
LTAETVRRRI DTNVLSAINP PTTLGLTAND KLERNRLSID YDFRDDASRW FQTAHVQLYY
QESKQDQDAF ETRGGRLQSR SRSNHYSERA FGGSAFAESG FATGPLAHKL LYGVDGSIDR
IKSLRDGAVA SPGESFPNKA FPDTDYTLFG AFVQDQIGFG KLLVTPGLRF DAYRLSPSAG
DPLFTGKTVS SSDHELSPRL AVLYEVTPAL IPYAQYAHGF RTPTPDQVNN SFSNPIYGYT
SIGNPNLKPE TSDTLEAGLR GTLGTGYGPL RYGVAAFAGR YRNFIAQRMI GGSGRPNDPL
VFQYVNFTNA RIHGFEGRAE WVMPNGFTLK TAMAFTKGTT RDNGAASEPL DTVNPFSAVF
GVRYEPSERW FAQADLLLQA GKRGRDVSSA ACREKTCFTP PSSFVVDLRG GYHFNKHVSA
YLGIHNLFDR KYWNWSDVRG IAADSNVLDA YTAPGRSVAV SMKVDF
|
|---|
| |