| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2104 |
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| Symbol | |
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| ID | 3846580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2584453 |
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| End bp | 2585985 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637839405 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_440292 |
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| Protein GI | 83717404 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.409236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA CCAACATCAA CGAACGCATC GCGCGCGTCG CGAAGATCGC GGCGGCGAGC
GGGCTGCTCG TCGCGCTGCT TGCCGCGTGC GCGGTCGGGC CCGACTACAG GCGGCCGGAT
GTCGCGACGC CCGCCGCGTT CAAGGAAGCG CCGGCGCTCG CGCCGGGCGA GCAGGCCGGC
ACGTGGAAGA CGGCCGAGCC CGCCGACGAC GCGCATCGCG GCGAATGGTG GCGCGTATTC
GGCGATCCGG CGCTCGATGC GCTCGAAACG CAGGCGCTCG CCGCGAACCA GAACCTGAAG
GCCGCGGCGG CGCGCGTCGA GCAGGCGCGC GCGGCGACCC GCGCCGCGCG CTCGCAGTGG
TTCCCGCAAG TGGGCGTGGG CTTCGGGCCG ACGCGCGAGG GGCTGTCGCC GGCGTCGCAG
TTCCAGCCGC AGGGCAGCGG CCCGACGAAC GCGACGCTCT GGCGCGCGCA GGGCACGGTG
TCGTACGAGG CGGATCTGTT CGGCCGCGTC GGCCGCAACG TCGAAGCGTC GCGTGCGGAC
GAAGCGCAGA GCCAGGCGCT GTTCCGCTCG GTGCAGCTCG CGTTGCAGGC GGACGTCGCG
CAGAACTACT TCGAGCTGCG CCGGCTCGAT TCCGATCAGG ATCTGTACCG CCGCACGGTC
GAGCTGCGCG AGGAGGCGCT GAAGCTCGTG CAGCGGCGCT TCAGCGAAGG CGACATCAGC
GAGCTCGACG TGTCGCGCGC GAAGAACGAG CTCGCGACCG CTCAGGCGGA CTCGGTCGGC
GTCGCACGGC GGCGCGCCGC GTCCGAGCAC GCGCTCGCGA TCCTGCTCGG CAAGGCGCCC
GCTGATTTCT CGTTCAAGGA AACGCCGATC GTGCCGGTCG CGGTGCGCGT GCCGGCGGGG
TTGCCGTCCG CGCTGCTCGA GCGGCGGCCG GACATCGCGG CGGCCGAGCG CGCGATGATG
GCCGCGAACG CGCGCATCGG CCTGGCGAAG TCCGCGTATT TCCCGAAGCT CGACATCACG
GGTTCGTTCG GCTATGAAGC GGCGACGCTC GGCAATCTGT TCCTGTGGTC GAGCCGCACG
TTCCTGCTCG GACCGTTCGC GGGCACGGCG CTCACGCTGC CGATCTTCGA CGGCGGACGC
CGCAGCGCGG GCGTCGCGCA GGCGCGCGCG AAGTACGACG AGGAAGTCGC GAACTATCGG
CAGCAGGTGC TCGTCGCGTT CCGCGAAGTG GAGGACAACC TCGCCGATCT GCGTTTGCTC
GACGATCAGA TCCGCGCGCA GAGCGATGCG GTCAACGCGT CGCGTCGCGC GGCGAAGCTG
TCGCGCACGC AGTATCAGGA AGGCGCGGTC AGCTATCTCG AGGTGATCGA CAGCGAGCGC
TCGGTGCTCG AGTCGCAATT GCAGTCGAAT CAGCTGACGG GCACGCAGGC GGTATCGACG
GTCAACCTGA TTCGCGCGCT CGGCGGCGGT TGGGGAAACG ACGTGGCCGT CGGTTCGCGC
GAGCCGAACA AGCAGGACGT CGCGGCACGT TGA
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| Protein sequence | MNKTNINERI ARVAKIAAAS GLLVALLAAC AVGPDYRRPD VATPAAFKEA PALAPGEQAG
TWKTAEPADD AHRGEWWRVF GDPALDALET QALAANQNLK AAAARVEQAR AATRAARSQW
FPQVGVGFGP TREGLSPASQ FQPQGSGPTN ATLWRAQGTV SYEADLFGRV GRNVEASRAD
EAQSQALFRS VQLALQADVA QNYFELRRLD SDQDLYRRTV ELREEALKLV QRRFSEGDIS
ELDVSRAKNE LATAQADSVG VARRRAASEH ALAILLGKAP ADFSFKETPI VPVAVRVPAG
LPSALLERRP DIAAAERAMM AANARIGLAK SAYFPKLDIT GSFGYEAATL GNLFLWSSRT
FLLGPFAGTA LTLPIFDGGR RSAGVAQARA KYDEEVANYR QQVLVAFREV EDNLADLRLL
DDQIRAQSDA VNASRRAAKL SRTQYQEGAV SYLEVIDSER SVLESQLQSN QLTGTQAVST
VNLIRALGGG WGNDVAVGSR EPNKQDVAAR
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