| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2090 |
|---|
| Symbol | |
|---|
| ID | 3846721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2554346 |
|---|
| End bp | 2555740 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637839391 |
|---|
| Product | syringomycin synthesis regulator SyrP, putative |
|---|
| Protein accession | YP_440278 |
|---|
| Protein GI | 83717350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGGC GTGCTCGGCG TCCGCGCCGG CCACGGCGCC GGCAAGCGCG GCATCGGCGA
CGGACGTTGC GGCATACGCG CCGGCAAGGA TCGCGACAGC GCTCGACGAT TCAACGCTCG
GCGGCTGTGT GCGCGCGGCG GCGCCGGGCC GGCGTCGATA GCGCCGGTGA CGTCGGAATC
GGGCCGGGCT TCGGCTTCGG CTTCGGCAGC ATCCCGTATC CGGACCGCCG TCGCCCTCGC
CGAGCCATTG CGATGCGCGA CGCAACGCAA TGCCGCCGCT CCGATCACGC GCGCCGACCA
CCGCAGGCCG CCGGCGCGCG CGATCGCGCA TCGCCCCGCC CGCTTCATCA ACGCATGGAG
AAACGCGCTA TGGATAGCTT CATCGAACTG CAAGAAAACG ACCGGCGCCA GGTGCCCGTG
CGCGGCCGCG CGTATCTCGC CGGCGCAGAC AGCCCGCTCG TGCCGGTGAC GATTCCGGTC
GCGAACGATC TGGCGCTCAA GCTCGCGCAC GCGGCCGACA CGCCCGCCGA AGCCGCCGCG
CGCTGCCGCG ACGCGATCGA CGCGCGCCTG CCCGACACCG GCGCGCTGCT GTTCCGCGGG
CTGCCGATCG CGGATCGCGC GGGCTTCGAC ACGTTCATGC ACGCGCTCGG CTACGCGCCG
CACAGCTACG ACGGCGGTAT CGCGGTGCGC GCGCGCGACG CGGGCTACGC GCTCGTCGCG
AGCCAGGAAG ACCCGCGCAT CACGATGGCG CCGCACAACG AGATGGCGTA TCTGCCGAAT
CCGCCGCGCA AGGTGTTCTT CTTCTGCGCG GCGGCCGCCG ACGAGGGCGG CGAGGTGCCG
ATCAACGACA TCCGGCTCAC GGCCGCGCAG ATCCCCGACG AGATCCTCGC GAAGTTCGAG
CGCAAGCGGA TCGGCTATCA CCGCTACCTG CCGCGCGACT CGACGCCGAC GCAGATCGGC
TGGACGGACA CGTTCGGCGT GCGCGAGCGC GACGCGGCCG ATGCGCTGAT GCGCGACAAG
GGCTACGCGC ACCGCTGGCT CGACGACGAC GGCCTCGTCT ACGGCTACGT GCACGACGCG
TTCCTCGACG ATCCGGCGGG CGGCGCGCCG CTGTGGTTCA ACCAGGTGAC GGAGCTGCAC
GCGTCGTACT GGCGCAGCCA TCCGCTCTTC CCGTCCGACT GGGACGACGC GCGCTACCCG
GCGACGACGA CCTACGGCGA CGGCGAGCCG ATCGACCCCG AACTCGTCAC GAAGCTGCGC
GCGGCGCTGT GGCGCACGTC GCGCGCGGTC GCGATGCGCC CGGGCGACGT GCTCGTGCTC
GACAACGTCT ACGTGCAGCA CGGCCGCTTC GCGTTCTCCG GGCCGCGCCT GCATCTCGTC
AGCCTGACCG ACTGA
|
|---|
| Protein sequence | MRRRARRPRR PRRRQARHRR RTLRHTRRQG SRQRSTIQRS AAVCARRRRA GVDSAGDVGI
GPGFGFGFGS IPYPDRRRPR RAIAMRDATQ CRRSDHARRP PQAAGARDRA SPRPLHQRME
KRAMDSFIEL QENDRRQVPV RGRAYLAGAD SPLVPVTIPV ANDLALKLAH AADTPAEAAA
RCRDAIDARL PDTGALLFRG LPIADRAGFD TFMHALGYAP HSYDGGIAVR ARDAGYALVA
SQEDPRITMA PHNEMAYLPN PPRKVFFFCA AAADEGGEVP INDIRLTAAQ IPDEILAKFE
RKRIGYHRYL PRDSTPTQIG WTDTFGVRER DAADALMRDK GYAHRWLDDD GLVYGYVHDA
FLDDPAGGAP LWFNQVTELH ASYWRSHPLF PSDWDDARYP ATTTYGDGEP IDPELVTKLR
AALWRTSRAV AMRPGDVLVL DNVYVQHGRF AFSGPRLHLV SLTD
|
|---|
| |