| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1983 |
|---|
| Symbol | rfbG |
|---|
| ID | 3845875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2410797 |
|---|
| End bp | 2411870 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637839284 |
|---|
| Product | CDP-glucose 4,6-dehydratase (O-antigen-related) |
|---|
| Protein accession | YP_440177 |
|---|
| Protein GI | 83716161 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCGG CCGATTCCGG ATTCTGGCGC GCCAGGCGCG TGCTCGTGAC GGGGCACACG
GGCTTCAAGG GAAGCTGGCT GAGCCTGTGG CTGCAGTCGC TCGGCGCGCA TGTCCACGGG
CTCGCGCTCG AGCCGCCGTC GCGCCCGTCG CTGTTCGAGA CGGCGCGCGT CGCGCAACAC
ATGTCCAGCA CGATCGGAGA CATACGCGAT TACGACGTCG TTCGGCGGGC GATCGCCGAT
TGCATGCCCG AGGTGGTGAT CCATCTGGCC GCGCAGCCGC TCGTACGCGC GTCCTACGCG
GACCCGCTGT CGACCTACGG CACCAACGTG ATGGGCACGG TCAATCTGCT GGAGGCGCTG
CGCCGCGCCG GCTGCGCGCG CGCCGTCGTC AACGTCACCA CCGACAAATG CTACGAGAAC
CGGAACTGGC TCTGGGGCTA TCGCGAGAGC GACGCGCTTG GCGGCCGCGA TCCGTACAGC
AGCAGCAAGG CGTGCTCGGA GATCGTCAGC AGCGCGTACC GGCGCTCGTT TCTCGAGCGA
GGCGCGACGG CGCTCGCGAC CGCGAGAGCC GGCAACGTCA TCGGCGGCGG CGACTGGGCC
GCGGACCGCC TCGTGCCGGA CGTGCTCGGC GCCTTCGCAT GCGGCCGGCC GGCGGTCATT
CGTCATCCGC GCGCGGTTCG TCCCTGGCAG CACGTGCTGG ATTCGCTGTC GGGCTATCTG
CGTCTCGCCG AGCGCCTTCA TGGCGAGGGG CAGGCGTGGG CCGAAGCGTG GAACTTCGGC
CCGGACGATG CGCAGGCCCG CACGGTCGAG TGGGTGGTGT CGCGGATGGC GAGCATCTGG
GGCGAGGGGG CGCGATGGCA TCCCGATCCG GCCGACCATC CGCACGAAGC CGCGCAACTG
AAGCTCGACG CGTCGAAAGC GACGGCGAGA CTCGGGTGGC GGCCGCGCTG GAGCCTCGTG
CGCGCGCTCG AGCGCACGAT CGCGTGGCAT CGCGCATGGC TCGCTCGTGA GGACATGCGA
GCGGTGTGCA TCGAACAGAT CACGGAATTC GATACTTCGG CCGAGCCGAC CTAG
|
|---|
| Protein sequence | MHAADSGFWR ARRVLVTGHT GFKGSWLSLW LQSLGAHVHG LALEPPSRPS LFETARVAQH
MSSTIGDIRD YDVVRRAIAD CMPEVVIHLA AQPLVRASYA DPLSTYGTNV MGTVNLLEAL
RRAGCARAVV NVTTDKCYEN RNWLWGYRES DALGGRDPYS SSKACSEIVS SAYRRSFLER
GATALATARA GNVIGGGDWA ADRLVPDVLG AFACGRPAVI RHPRAVRPWQ HVLDSLSGYL
RLAERLHGEG QAWAEAWNFG PDDAQARTVE WVVSRMASIW GEGARWHPDP ADHPHEAAQL
KLDASKATAR LGWRPRWSLV RALERTIAWH RAWLAREDMR AVCIEQITEF DTSAEPT
|
|---|
| |