| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1982 |
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| Symbol | rfbH |
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| ID | 3845873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2409441 |
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| End bp | 2410793 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637839283 |
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| Product | lipopolysaccharide biosynthesis protein (O-antigen-related) |
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| Protein accession | YP_440176 |
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| Protein GI | 83716159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA TTCGCTCCAC GCCCGCGCCG GATGCGACGA GAAGCCCGGA CGTCATCCGC
GCGGAAATCG CCGCGCTGGT TCGAGAGTAT GCGGACGCGA CGCAGGCGCG CGGCCCGTTC
GTGCCGGGAC GCACGCCCGT GCCCGTATCC GGCAAGGTGA TCGGCGCGCC GGAGTTGCAG
CACATGGTGG ACGCGAGCCT GGACGGCTGG CTGACGGCGG GGCGCTTCAA CACCGCGTTC
CAGAACAGGC TCGCGCGCTA TCTGGGCGTG AGGCATGTGA TCACGGTGAA CTCCGGTTCG
TCGGCGAATC TCGTGGCGTT CTCGGCGCTG ACCTCCGAGC GCCTCGGCGA GCGGGCGATC
CGCCCCGGCG ACGAAGTGAT CGGCGTGGCC GCGGGATTCC CAACGACGGT CAATCCGATA
CTGCAATTCG GCGCGGTGCC GGTGTTCGTC GACATCGAAC TTGGCACGTA CAACGTCGAC
GCGACGAAGA TCGAAGCGGC GATCTCGCCG CGGACCAAGG CGATCATGCT CGCGCACTGC
CTGGGCAATC CGTTCAATGT CGAGGCCGTG ACGTCGCTGT GCCGCAAGTA CGGGCTGTGG
CTGATCGAGG ATTGCTGCGA CGCGCTGGGA GCGCAGTACG ACGGGCGGCT CGTGGGCACG
TTCGGCGACA TCGCGACGCT GAGCTTCTAT CCGGCGCACC ACATCACGAT GGGCGAGGGC
GGCGCGGTGT TCACCGACGA CGACGAGCTC GCGCGCATCG CCGAGTCGTT CCGCGACTGG
GGCCGGGACT GCTACTGCGC GCCGGGCGCC GACAACACCT GCGGCAAGCG CTTCTGCCGG
CAGCTCGGCG AGCTGCCGCG CGGCTACGAC CACAAGTACA CGTACAGCCA CTGCGGCTAC
AACCTCAAGA TCACCGACAT GCAGGCCGCC TGCGCGCTCG CGCAGATGGA TCGCGTCGAC
GGATTCGTCG AGCGGCGCCG CGCCAACTTC GCCTACCTGA AGGAGCGGCT GTCGCAATGC
GACGCGTTCC TGCATCTGCC GCAGGCGACG CTCAACTCGA ATCCGTCGTG GTTCGGCTTC
CCGCTGACGC TGAAGGAGGA CACGGGCGTC GCGCGAGTCG ATTTGCTCGA TTACCTGAAC
CAGAACGGCG TCGGCACGCG CCTGCTGTTC GCGGGCAATC TGACGCGCCA GCCGTACATG
CTGCATCGGC GGTATCGCGT GAGCGGCGAG CTGGCGCTCA CCGATGCCGT GATGGAGCGC
ACGTTCTGGA TCGGCGTTTT TCCGGGATTG GACGAGGCGA TGCTCGATTA CGCGTGCACG
AAAATCGAGA CGTTCCTGGG CATCAATTTT TGA
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| Protein sequence | MDIIRSTPAP DATRSPDVIR AEIAALVREY ADATQARGPF VPGRTPVPVS GKVIGAPELQ
HMVDASLDGW LTAGRFNTAF QNRLARYLGV RHVITVNSGS SANLVAFSAL TSERLGERAI
RPGDEVIGVA AGFPTTVNPI LQFGAVPVFV DIELGTYNVD ATKIEAAISP RTKAIMLAHC
LGNPFNVEAV TSLCRKYGLW LIEDCCDALG AQYDGRLVGT FGDIATLSFY PAHHITMGEG
GAVFTDDDEL ARIAESFRDW GRDCYCAPGA DNTCGKRFCR QLGELPRGYD HKYTYSHCGY
NLKITDMQAA CALAQMDRVD GFVERRRANF AYLKERLSQC DAFLHLPQAT LNSNPSWFGF
PLTLKEDTGV ARVDLLDYLN QNGVGTRLLF AGNLTRQPYM LHRRYRVSGE LALTDAVMER
TFWIGVFPGL DEAMLDYACT KIETFLGINF
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