Gene BTH_II1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1978 
Symbol 
ID3845134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2403530 
End bp2404738 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content60% 
IMG OID637839279 
Productlipopolysaccharide heptosyltransferase II rfaC2 
Protein accessionYP_440172 
Protein GI83716375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TGTTCATCAA GCTCTCTGCA TTGGGCGACG TGCTGGCCAG CACGCCGCTG 
TTCGCCTCGA CGAAGGCCGA GCATCCGGAC TGGTTCGTCG GGCACGTGGT AGCACGTCCC
TATGCCGATG CGACGAGAAA CAATGCGCAT GTCGATGCGC AATTCGTTGT CGATTCACCT
CTTTCGAAAG GGCTGGCGGA GAAGATCGGC GTGGCGGTGG GAATATGGCG CTACGTGCTG
CGCGAGCGAT ACGACATCGC GGTTGTGCTG CATCGGAGTT TTGTACTACA ACTCATATGT
CGTCTCGCGT TGGTCAAGAA AGTCGTCGGA TACGAGGGGC CGTTCAGCTT CATATTGAAT
CACTCCATTC CGTTTTCGAT GCGGGGAAAT CGAAGCAATC TGGAGCTGCG TTTACTGAAA
TCGGCGGGAA TCATTCGCGA CGAAAAGAAG AAGTTGAGGT TCGACATCGA CTTCGGCAAC
GTGGACCCGA GCCGGCTGCG CGCATTGCCG GATGCGTTCA TCGCCGTCAA TGCCGGCGGC
GGTAATGCGG ATGCGCACGC CGCCAACAAG CTGTGGCCCG CCGAGCATTA CGGCGCATTG
ATCAAGCAGT TGCCGTTGCC GGCCGTGATG CTCGGTCATG GCGCGGCGGA CGAGCGCATC
AGGGATCGGG TCGCGGCGAC GGGGGCGACG TTCGTCGACC TGATCGGCAA GACGAATCTC
GATGAAACGG CTGTCGTCCT GAGGCGCTCG AGCCTGTACG TGGGCAACGA CAGCGCGCTG
TTGTATCTGG CGGCATCGCT CGGCGTGACG ACGATCGGAA TCTACGGGCC TACCGATCCC
GCTGCGTTCA GTCCGTTGGG CGCGAACAAT CTGTGGCTGA GTGGCAAGAC GTCCTGTGCA
CCGTGCTATT CGTCTTTCGA CGGGATTGGC GGGCGCATGT ACACGTGCGC GGACAACATT
TGCATGAAGG CCGTTACGGT CGAATCCGTC AGCGAGAGAA TCCATGCAGC CCTCCATCAA
GATCAGAATC TACAAGTGGC TGGACCGGAT GTTGTCGGAT CTGGTCAGGG TGGTGCCGCA
TCCGAAGCGG GCGATCGGGC GAGGGCCCAC GCGCGTGCTG GTCATCAAGC TGTCGGCGAT
GGGGGATTCG CTGTGCCTGT TTCCCGCCGT CCGCCAGTTG GCGCTCGCGT TTCCGGACGC
GACGATTGA
 
Protein sequence
MKILFIKLSA LGDVLASTPL FASTKAEHPD WFVGHVVARP YADATRNNAH VDAQFVVDSP 
LSKGLAEKIG VAVGIWRYVL RERYDIAVVL HRSFVLQLIC RLALVKKVVG YEGPFSFILN
HSIPFSMRGN RSNLELRLLK SAGIIRDEKK KLRFDIDFGN VDPSRLRALP DAFIAVNAGG
GNADAHAANK LWPAEHYGAL IKQLPLPAVM LGHGAADERI RDRVAATGAT FVDLIGKTNL
DETAVVLRRS SLYVGNDSAL LYLAASLGVT TIGIYGPTDP AAFSPLGANN LWLSGKTSCA
PCYSSFDGIG GRMYTCADNI CMKAVTVESV SERIHAALHQ DQNLQVAGPD VVGSGQGGAA
SEAGDRARAH ARAGHQAVGD GGFAVPVSRR PPVGARVSGR DD