Gene BTH_II1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1951 
Symbol 
ID3845361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2374718 
End bp2375647 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID637839252 
Productputrescine ABC transporter, permease protein 
Protein accessionYP_440145 
Protein GI83716719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC CCAACAAACC GCTTCGCGCC GGCGTGCTGA CGCTCGGCTT CCTGTTTCTC 
TACATCCCGA TCGTGAGCCT CGTCGTCTAT TCGTTCAACG AGTCGAAGCT CGTCACGGTC
TGGTCCGGCT TCTCGCTGAA ATGGTACGCG GCGCTGTGGC AGGACGACGA GTTGCTGACG
AGCGCGTGGC TATCGCTGAA GATCGGCCTG CTGACCGCGT TCGCATCCGT GTTCATCGGC
ACGTGGGCGG GCTTCGTGCT CGCGCGCTTC GGACGCTTTC GCGGCTTCAC GCTGTACACC
GGGATGATCA ACGCGCCGCT CGTGATTCCC GAAGTGATCC AGGGGATCTC GCTGCTGCTG
CTGTTCGTCG CGCTCGAACA GATGGTCGGC TGGCCAAAGG GCCGCGGGAT GGTGACGATC
TGGATCGGCC ACGTGATGCT GTGCGTGTCG TACGTCGCGA TCATCGTGCA GTCGCGCGTC
AAGGAACTGA ACAAGTCGCT CGAAGAAGCG GCGCTCGACC TCGGCGCAAC GCCGCTCAAG
GTGTTCTTCG TGATCACGCT GCCGCTGATC TCGCAGGCGC TGCTGTCCGG CTGGCTGCTG
TCGTTCACGC TGTCGATCGA CGATCTCGTG CTCTCCGCGT TCCTGTCCGG CCCCGGTTCG
ACGACGTTGC CCCTCGTCGT GTTCTCGCGC GTGCGTCTCG GCCTGAACCC CGAGATGAAC
GCGCTCGCGA CGCTCTTCAT CACCGCGGTG ACGATCGGCG TGATCGTCGT CAATCAGATG
ATGCTGAGCC GCGAGCGGCG GCGCGAGCGC GACATGCGCC AGGCGTTCGC GCAGCCGGCG
CCTTCCGACT CGTCCGAATC CGACTCGGCC GGCGGCGTTG CTCGCCCGCC GCAAGCCGCG
GCGACGCGCA AGTCGCTCGG CACGGCCTGA
 
Protein sequence
MIKPNKPLRA GVLTLGFLFL YIPIVSLVVY SFNESKLVTV WSGFSLKWYA ALWQDDELLT 
SAWLSLKIGL LTAFASVFIG TWAGFVLARF GRFRGFTLYT GMINAPLVIP EVIQGISLLL
LFVALEQMVG WPKGRGMVTI WIGHVMLCVS YVAIIVQSRV KELNKSLEEA ALDLGATPLK
VFFVITLPLI SQALLSGWLL SFTLSIDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN
ALATLFITAV TIGVIVVNQM MLSRERRRER DMRQAFAQPA PSDSSESDSA GGVARPPQAA
ATRKSLGTA