Gene BTH_II1897 details

Gene Information

• Locus tag: BTH_II1897
• ID: 3844991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: -
• Start bp: 2302475
• End bp: 2304337
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637839198
• Product: hypothetical protein
• Protein accession: YP_440091
• Protein GI: 83716407
• COG category: [S] Function unknown
• COG ID: [COG3519] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03359] type VI secretion protein, VC_A0110 family

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTCC TCGATCACTA CAACGACGAA TTGCGCCAGC TGCGCGATGC CGGCGCGCGC 
TTTGCGAAAG AGCACCCGCA GGTCGCGTCG GCGCTCGGGC TGCATCCCGA TGCGGTCACC 
GATCCGTTCG TCGAGCGGTT GCTCGAGGGC GTCGCGTATC TGTCGGCGCG CGTGCAGAAG 
CGGCTCGATC GCGAGTGCGC CGAGTTCGCG CAGCAGGCGC TCGGGCGCAT CTGCCCGCTC 
TACATGGCGT CGACGCCCGC GATCTCGACG TTCGCGTTCC ATCCGGATCT CGGCTCGCCC 
GACGCGTTTC GCGGCAATAC GCTGCCGCGC GGCTCGCTCG TCGCCGCGCA TCTGCCGGGC 
CGCAAGCTGC CGGTGATGTT CTCGACCGCG CGCGACGTCA CGCTGCTGCC GCTGCGTCTG 
GCGTCGGTCG AGTGCAGCCG CAGCATCACC GGGCTGCCGT CGCTGCTCTC GCAGCGGCTG 
GCATCGTCGC ATGCGGTGCT GCGCTTCAGG TTCGAGGTCG AAGGCGGCGC GTCGATCGCG 
GAGCTCGCGC GCGAGGACGA GGGTTTCAAG CCGCTGCATC TGAGTCTCGC GGGCGATCTG 
CCGCGCGCCT ATGCGCTGCA TCGCGCGATG CTCGCCGATA CGACCGCGTG GTATGCGCTC 
GTGTCGACCA ATCGCGGCGA CGAGGTGCTG ACGTTGCCGA TGTCGGGCAT CCGGCTGTCC 
GGCGTCGACG ATGCGGAGGC GCTGCTGCCG GAGGAGTTCG GCGGCTTGCC CGGCCTGCGG 
CTGCTGCGCG AGTACTTCGC GCAGCCGACG CGTCTGCTCG GCGTCTACGT CGACGCGCTG 
GCGGCGATCG CCGCCAAGGC GCCGTCGGCG CGGGCGTTCG AGCTGTTCTT CGCATTACGC 
GACGCACCGG GCGATCTGGT CGGCGACGTT GACGCGAGCC AGTTCCGCCT GTTCGCGACG 
CCGGCGATCA ATCTGTATTC CAAACGTTTC GATCCGGTGC CCTACGACGC GAATCAGCCC 
GAGCAGTGGA TTCCCGTCGA CCGGATGCGG CCCGCCGCGC ATCACCTGTG GGCGCTGACC 
GAGGTGTTCG TGTGCGAGAC CAACGGTCGA GCGCATCGCG CGCGCTCGGT GCTCGAGACG 
GCGGGCTATG AGGGCCACGA GGGCTCGATC CGCTACGGCA TGCGGCGCGA GGATGCGCTG 
CTCGTCGACG GCGTGCGGCG TGATCGGTTC GATCCGCTCG CGAGCCACGA CCTGATCGCC 
GTCTCGATGG TCGACGACAC GCTCGACCCG GACGACGTCG CGACGATCAC GGGCCGCGCG 
CTCGTGGCCG ATCGCGACTG GCGTCCGACC GGGCTGCTCG ACGCCGACCT GCAACTGCTC 
GATCCGACCG CCGTCAAGCG TATCGAGTGC CTGTGGCCGG CGAGCGCGCC GCGCGGCAAG 
CCGAGCGTCG ACGCGTGCTG GGAAGCCGTG TCGCACGTCG GCCGCAATCC GCTCGCGCTG 
CACGCGTCGC AACAGCAGGA CGTGACGGCG CGCATCGTCG AGCAACTGCT GCTCGCGATC 
GACAAGGACG ATGCGCTCGA CCGGCAACGG CTCGAGAGCC TGCGCTCGGT CCTGCTGCGC 
TCGCGCTTCG TCGCGGCGGG CCGGGCGACG CCCACCGCGC TCGTGCGCGC GACGCAAGTC 
GAGATCGATA TCGCCGAATC GCTGCATGCG GATCGCGGCG GCTGGCTGTT CGGGCGGCTG 
CTCGCGCAGG CGCTCGCCGA GGCCGCGACG CTCAATGACG GCATCGAGAT CGTCGTGCGC 
CTCGACGGCG AGGCGGCGAG CACGCACACG AACGTCGCGG CGCGCGACGG GAGGCTCGCA 
TGA 

 

Protein sequence

MNFLDHYNDE LRQLRDAGAR FAKEHPQVAS ALGLHPDAVT DPFVERLLEG VAYLSARVQK 
RLDRECAEFA QQALGRICPL YMASTPAIST FAFHPDLGSP DAFRGNTLPR GSLVAAHLPG 
RKLPVMFSTA RDVTLLPLRL ASVECSRSIT GLPSLLSQRL ASSHAVLRFR FEVEGGASIA 
ELAREDEGFK PLHLSLAGDL PRAYALHRAM LADTTAWYAL VSTNRGDEVL TLPMSGIRLS 
GVDDAEALLP EEFGGLPGLR LLREYFAQPT RLLGVYVDAL AAIAAKAPSA RAFELFFALR 
DAPGDLVGDV DASQFRLFAT PAINLYSKRF DPVPYDANQP EQWIPVDRMR PAAHHLWALT 
EVFVCETNGR AHRARSVLET AGYEGHEGSI RYGMRREDAL LVDGVRRDRF DPLASHDLIA 
VSMVDDTLDP DDVATITGRA LVADRDWRPT GLLDADLQLL DPTAVKRIEC LWPASAPRGK 
PSVDACWEAV SHVGRNPLAL HASQQQDVTA RIVEQLLLAI DKDDALDRQR LESLRSVLLR 
SRFVAAGRAT PTALVRATQV EIDIAESLHA DRGGWLFGRL LAQALAEAAT LNDGIEIVVR 
LDGEAASTHT NVAARDGRLA