| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1895 |
|---|
| Symbol | |
|---|
| ID | 3845030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2298643 |
|---|
| End bp | 2301486 |
|---|
| Gene Length | 2844 bp |
|---|
| Protein Length | 947 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637839196 |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
|---|
| Protein accession | YP_440089 |
|---|
| Protein GI | 83717751 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATCGCG AACGCATATT CAACTGTCTC GGCCGCACGA CCTATGCGGC CCTTGTCGAT
GCGACGGCGC TAGGCCGATC CCGTCGGCAT GCCTTCATCG ATCTCGATCA CTGGGCACTG
TGCCTGCTGC AGCGCGAGCA GAGCGATCTC GCGCGGCTGT TCGAGCAGTT CGGCAGCGAT
GTCGGCGAAG CGAAGCGCCG GATGGAGAAG GCGCTGGACG GCTTCGACGT GAGCGGCGAC
TCGCTGCGCG ACATCTCCAG CTCGCTCGAG CGCAGCGTCG GGCCGGCCGT CATCTGGAGC
CAGATCGCGG CGCGCGCGGG CAAGGTGCGC TCCGGCCACC TGTTGCTCGC GTGGCTCGAC
GAGGATCTGA CGCGCCGCTG GTTGCAGCAG CGCGTGCCGA ACGGCATCAC GTCGGTCGCG
CTCGACGAGG TGGTGAAGCG CTATGAGGCG CTCGCGCCCG GCTGGACGGA AACCGACGAA
GCGCCCGCGG CGCTCGACGG CGGCGCGCTT GGCGCGGAAG CGGGCGAGGC CGGCGCCGAC
GGCACGAGCG ACGCGCTCGC GAAATGGGCG ACGTGCGTGA CCGAGCAGGC CGCGCGCGGC
GAGCTCGATC CCGTGGTCGG CCGCGACGAT GAATTGCGCA CGGTGATCGA CATCCTGTCG
CGCCGCCGCC AGAACAACCC GATTCTCGTC GGCGAGGCAG GCGTGGGCAA GACGGCCGTC
GTCGAGGCGC TCGCGCAGAA GATCCACGCG GGCGCGGTGC CGCCGGGCCT CATCGGCGCG
CAGGTGTGGG CGCTCGATCT GGCGCGGATG CAGGCGGGCG CGGGCGTGCG CGGCGAGTTC
GAGCAGCGCC TGAAATCGCT GATCGACGCG GTGATCGCGT CGGCCGCGCC GATCATCCTG
TTCTGCGACG AGACGCATAC GCTGATCGGC GCGGGCGGCG CGGCCGGCAC GGGCGACGCG
GCGAACCTGA TCAAGCCGAT GCTCGCGCGC GGCCAGTTGC GGATGGTCGC CGCGACGACG
TGGTCCGAAT ACAAGCAGTA CATCGAGCCG GATGCGGCGC TCGTGCGGCG CTTCCAGGCT
GTTCCGGTCG ACGAGCCGAG CGACGACGCG GCGGTCGACA TGCTGCGCAC GATCGCGCCG
CGCTTCGCGG CGCACCACGG CGTGCGGATC GTGGATTCGG CGCTGCGCGG CGCGGTCGAG
CTGTCGCGCC GCTATCTGCC CGCGCGGCAG TTGCCGGACA AGGCGATCAG CCTGCTCGAC
ACCGCGTGCG CGCGCGTCGC GATGAGTCAG AACTGCGCGC CCGCCGAGCT CGAGCGCTTG
CAGCATCAGG CGTTCGCGAT CGGCCAGACG CTCGATTGGC GTGCGAGCGA CCGCCGCATG
GGCGTGCGCA CGCCGGGCGA CGAAGCCGAG CTCGAGGGCC GCCAGGCGAG CCTCGTCCAG
CAGGCGGCCA CGCTCGAGAC GGTCGTCGAC GCGCAGCGCG ACGAAGTGCG TTCGTGGCTC
GCGCGTCTGA ACGACGAGAC GCATGTGTCT GCCGACAGCG ACGGCGATTC GTTCGCCGCG
CGCATCGGCG CGAATCGCTG GGTGCGGCCG TGGGTCGACG AGCACGTCGT GTCGGAGGTG
CTCGCCGAGT GGACGGGCGT GCCCGTCGCG CAGCTCGCGC AGGACGACGC GCAGCGCGTG
GTCGAGCTCG AGGGGGCGCT CAATGCGGGC ATCCACGGGC AGACGGGCGC GATGCGCTCG
ATCGCGCAGG CGCTGCAGGT GTCGCATTCG GGGCTCAACG ATCCGCGCCG GCCGCTCGGC
GTGATGCTGC TCGCCGGCCC GACCGGCACC GGCAAGAGCC AGGCCGCGGC GAAGCTCGCC
GAGCTGCTGT TCGGCGGCGA GCGCAACCTG CTGCAGTTCA ACATGAACGA GTTTCAGGAA
GCGCACACGG TGTCGACGCT CAAGGGCGCG CCGCCCGGAT ACGTCGGTTA CGGCAAGGGC
GGGCGCTTGA CCGAGGCGGT TCGCAAGAAG CCGTACAGCG TGCTGCTGCT CGACGAATTC
GACCGCGCGC ATCCGGACAT TCATGAGGTG TTCTATCAAG TCTTCGATCA GGGCTGGATG
GAGGATGGCG AGGGCCGTCG GATCAGCTTC CGCAACTGCC TGATCCTGTT GACGAGCAAT
CTCGGCGACG TCGAGATCGA AGCGGCGTGC AAGGCCGATC CGCAGATTTC GCAGGCGAAG
CTCGACAAGC TCGTCGGCGA ACGGCTGCAG GGGCGCTTCT CGCCCGCGCT GCTCGCGCGG
ATTCAGCTCG TCGCGTTCCG TCCGCTCGAC GTCGACGCGC TGACCGGCAT CGCGACGCAG
GCGCTCGACG AACTCGGCGA GCGCCTCGCG GAGAACGATC TGCAATGGCG CGCGGACGAA
GGCGTCGCGT CGTGGGTCGC GCACGCGGTG TCGCAGCATC CGGCGAACGG GCGCGCGGTG
CGCGACCTGC TGCGCCAGCA CGTGATGCCG GCCGTCGCGC GCGGCGTGCT CGCCGCGCGG
GCCGAAGGGC GCGCGCTGAA GACCGTGCGG CTGTCCGCGC ACGAGAAGCT GTCGCTCGTG
TTCGACGAGG ATGCGCTGGA GATCGGCGGC ACCGATGCGG CCTCGCTCGG CGAGCAGGCG
GAGGCGGCGG CGCGCGAGGC TGCGGCGTCC GCTGCGGCGC ACGGCGCACC CGAAGCGCAT
GACGCACCTG AGTCGCGTGA CGTGCATGAA GCGAACGGCG ACATGCGTGC CGAAGCGGAC
GACGAACGTC CGGCCGATGC GCATCATCCC GACGAAACGA CCTCGGCGAA CGCCGGCACG
ACGGGAGAAC CGTCATGCGT CTGA
|
|---|
| Protein sequence | MNRERIFNCL GRTTYAALVD ATALGRSRRH AFIDLDHWAL CLLQREQSDL ARLFEQFGSD
VGEAKRRMEK ALDGFDVSGD SLRDISSSLE RSVGPAVIWS QIAARAGKVR SGHLLLAWLD
EDLTRRWLQQ RVPNGITSVA LDEVVKRYEA LAPGWTETDE APAALDGGAL GAEAGEAGAD
GTSDALAKWA TCVTEQAARG ELDPVVGRDD ELRTVIDILS RRRQNNPILV GEAGVGKTAV
VEALAQKIHA GAVPPGLIGA QVWALDLARM QAGAGVRGEF EQRLKSLIDA VIASAAPIIL
FCDETHTLIG AGGAAGTGDA ANLIKPMLAR GQLRMVAATT WSEYKQYIEP DAALVRRFQA
VPVDEPSDDA AVDMLRTIAP RFAAHHGVRI VDSALRGAVE LSRRYLPARQ LPDKAISLLD
TACARVAMSQ NCAPAELERL QHQAFAIGQT LDWRASDRRM GVRTPGDEAE LEGRQASLVQ
QAATLETVVD AQRDEVRSWL ARLNDETHVS ADSDGDSFAA RIGANRWVRP WVDEHVVSEV
LAEWTGVPVA QLAQDDAQRV VELEGALNAG IHGQTGAMRS IAQALQVSHS GLNDPRRPLG
VMLLAGPTGT GKSQAAAKLA ELLFGGERNL LQFNMNEFQE AHTVSTLKGA PPGYVGYGKG
GRLTEAVRKK PYSVLLLDEF DRAHPDIHEV FYQVFDQGWM EDGEGRRISF RNCLILLTSN
LGDVEIEAAC KADPQISQAK LDKLVGERLQ GRFSPALLAR IQLVAFRPLD VDALTGIATQ
ALDELGERLA ENDLQWRADE GVASWVAHAV SQHPANGRAV RDLLRQHVMP AVARGVLAAR
AEGRALKTVR LSAHEKLSLV FDEDALEIGG TDAASLGEQA EAAAREAAAS AAAHGAPEAH
DAPESRDVHE ANGDMRAEAD DERPADAHHP DETTSANAGT TGEPSCV
|
|---|
| |