| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1893 |
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| Symbol | |
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| ID | 3844973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 2293904 |
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| End bp | 2296192 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637839194 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_440087 |
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| Protein GI | 83716389 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA TCGAACTACG CAGTCCGCTC CTGGACCCGG ACGTCGTTGC GCTGAGCTTC
GTGGTGCACG AGAACCTGTC GCAGGAACCG TCGTATCAGC TCGACTTGCT GAGCCGCGAT
CCGAATCTGG ACTTCGACGA ACTGCTCGGC TCGACGCTGT CGGCCGACAT CGATCTGGGC
GGCGGCGACA TCCGGACGTT CAACACGCAC GTGTTCGGCG GCCACGACAC GGGGCAGATG
AGCGGGCAGT ACACGTACAC GCTGGAGCTG CGGAGCTGGC TGTCGTTTCT CGCGGAGAAC
CGCAACAGCC GGATCTTCCA GGACTTGAGC GTGCCGCAGA TCGTCGAGCA GGTGTTCCAG
GGCCATCAGC GCAACGGCTA CCGGTTCGAA CTGGAAGGCA CGTACGAGCC GCGCGAGTAC
TGCGTGCAGT TCCAGGAAAC GGATCTGAAC TTCGTGAAGC GGTTGCTGGA GGACGAAGGG
ATCTATTTCT GGGTCGAGCA CGAGCCGGAT CGGCATGTCG TGGTGATTTC GGACACGCAG
CGCTTCGAGG ATCTGCCGCT GCCGAACGAA ACGCTCGAGT ATTTGCCGGA CGGTGAGGAA
TCGCGGGCGA TCCAGGGGCG CGAAGGCGTG CAGCGGCTGC AGCGCACGCG CCGGATCAAG
GCGAGCAACG TCGCGCTGCG CGACTTCGAC TATCACGCGC CGTCGAAGCA ACTGGACAGC
GACGCGCAGA TCGAGCAGCA GAGTCTCGGC GGCATTCCGC TCGAGTACTA CGACTACGCG
GCCGGCTACC GCGATCCCGA GCAAGGCGAG CGCCTGGCGC GGCTGCGGCT TGAAGCGATT
CAGGCCGATG CACACGCGCT CGGGGGCGAG GCGAACGCAC GCGCGCTCGC GGTGGGTCGC
GCGTTCACGC TGGTTGGGCA TCCGGCGCTG AGCCGCAATC GTCGGTACTA CGTGACGAAC
AGCGAGCTGA CGTTCATTCA GGACGGGCCG GACAGCACGT CGCAGGGGCG CAACGTCGCG
GTGAAGTTCC GCGCGCTCGC CGACGATCGG CCGTATCGGC CGCTGCTCGT CACCAAGCGG
CCGCGCGTGC CGGGCATCCA GAGCGCGACG GTGGTGGGGC CAGAGATGTC GGAGGTGCAT
ACCGACAAGC TCGGGCGCAT CCGCGTGCAC TTCCACTGGG ACCGCTACAA GACGACCGAA
GCGGACGCCT CGTGCTGGAT TCGCGTGACG CAGGCGTGGG CCGGCAAGGG CTGGGGTGTG
CTCGCGATGC CGCGGGTCGG GCAGGAAGTG ATCGTCGTGT ATGTCGACGG CGATCTCGAT
CGCCCGCTTG CGACGGGCAT CGTCTACAAC GGCGAAAACC CGACGCCTTA CGACCTGCCG
AAGGACATCC GCTACACGGG CCTCGTCACG CGCTCGATCA AGCGCGCGGG CGGCATTCCG
AATGCGAGCC AGTTGACGTT CGACGATCAG CACGGCGCGG AGCGCGTGAT GATCCACGCG
GAGCGCGACT TGCAGCAGAC GGTCGAGCGC AACAGCTCCA CGTCGATCGC GCAGGACCTG
AATCTGTCGG TGAACGGTAC GTCGACGTCG GTCATCGGCA TCAAGGTCAG CTTCACCGGG
ATCTCGGTGT CGTACACAGG GCTGTCGGTG AGCTTCACGG GCGTATCGGC GAGCTTCACC
GGCGTGAGCA CATCGTTTAC CGGCGTGAGC ACGAGCTTCA CCGGCGTGTC GACGTCGTTT
ACCGGCGTGA CCACGGGCTT CACCGGCGTG TCGACTTCGT TCGTCGGCGT CGATACGAGC
TTCACCGGCA TCAGCACGGG ATTCGTCGGT GTGTCAACCA GCATCACGGG CTCCAAGAAT
TCCGTGACGG GCGTGTCGAA CAGCATGACG GGCATCTCGT CGTCGTGGAC CGACGTCAGC
ATGTCGACGA CCGGGCAGTC GCAGAGCATC ACGGGCGTAT CGCTGTCGTA CACGGGCACG
TCGAACAGCA TGACGGGCAC GAGCACGTCG GTGACGGGCA CGTCGACGAG CATCACGGGC
ACGTCGATGT CGAACACGGG CAGCTCGACG AGCATCACGG GCACGTCGAT GTCGACGACG
GGCAGCTCGG TGGGCACGAC GGGATCGAGC ATGTCGGCCA CCGGCAGCTC GGTGAGCACG
ACGGGTTCGA GCGTATCGAC GACGGGCAGC AGCATGTCGG TGACGGGATT CAGCTTCTCG
TACATCGGCG CGAGCTACTC GGACGTGGGC ATTGATCTGA AGAAGCTCGG GATGCAGACG
AAGAACTGA
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| Protein sequence | MRLIELRSPL LDPDVVALSF VVHENLSQEP SYQLDLLSRD PNLDFDELLG STLSADIDLG
GGDIRTFNTH VFGGHDTGQM SGQYTYTLEL RSWLSFLAEN RNSRIFQDLS VPQIVEQVFQ
GHQRNGYRFE LEGTYEPREY CVQFQETDLN FVKRLLEDEG IYFWVEHEPD RHVVVISDTQ
RFEDLPLPNE TLEYLPDGEE SRAIQGREGV QRLQRTRRIK ASNVALRDFD YHAPSKQLDS
DAQIEQQSLG GIPLEYYDYA AGYRDPEQGE RLARLRLEAI QADAHALGGE ANARALAVGR
AFTLVGHPAL SRNRRYYVTN SELTFIQDGP DSTSQGRNVA VKFRALADDR PYRPLLVTKR
PRVPGIQSAT VVGPEMSEVH TDKLGRIRVH FHWDRYKTTE ADASCWIRVT QAWAGKGWGV
LAMPRVGQEV IVVYVDGDLD RPLATGIVYN GENPTPYDLP KDIRYTGLVT RSIKRAGGIP
NASQLTFDDQ HGAERVMIHA ERDLQQTVER NSSTSIAQDL NLSVNGTSTS VIGIKVSFTG
ISVSYTGLSV SFTGVSASFT GVSTSFTGVS TSFTGVSTSF TGVTTGFTGV STSFVGVDTS
FTGISTGFVG VSTSITGSKN SVTGVSNSMT GISSSWTDVS MSTTGQSQSI TGVSLSYTGT
SNSMTGTSTS VTGTSTSITG TSMSNTGSST SITGTSMSTT GSSVGTTGSS MSATGSSVST
TGSSVSTTGS SMSVTGFSFS YIGASYSDVG IDLKKLGMQT KN
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