Gene BTH_II1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1879 
Symbol 
ID3846355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2276153 
End bp2277724 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content70% 
IMG OID637839180 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_440073 
Protein GI83716944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000219002 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC AGGCGATGTC GGCGGATCAG GCGGGCGTTG CGCCGCCGGC GGCCGCCCCG 
CTGCGCGGCG CGAAGCTCGC GCTGCTGACG TTCGCGCTGT CGCTCGCGAC GTTCATCGAA
GTGCTGGATT CGACGGTGGC GAACGTGGCG GTGCCGGCGA TCTCGGGCAG CCTCGGGGTG
TCGAACAGCC AGGGCACGTG GGTGATCAGC TCGTACTCGG TGGCCGCGGC GATCGCGGTG
CCGCTGACGG GGTGGCTTGC GCGGCGCGTG GGCGAGCTGA GGCTGTTCGT GGCGTCGGTG
ATCCTGTTCA CGCTGACGTC GCTGCTGTGC GGGCTCGCGC GGGACCTGGA GGTGCTGGTT
GCGTGCCGGG CGCTGCAGGG GCTGTTCTCG GGGCCGATGG TGCCGCTGTC GCAGACGATC
CTGATGCGCG CGTTCCCGCC GGCGCGGCGC ACGCTGGCGC TGGCGCTGTG GGGGATGACG
GTGCTGCTCG CGCCGATCTT CGGGCCGGTG GTGGGCGGCT GGCTGATCGA CAACTTCTCG
TGGCCGTGGA TCTTCCTGAT CAACCTGCCG ATCGGGCTGT TCTCGTTCGC GGTGTGCACG
CTGATGCTGC GCCCGCAGGC GCAGCGCGGC GAGGCGAGCC CGATCGACGC GCCGGGGATC
GTGCTGCTGG TGATCGGGGT GGGCTCGCTG CAGGCGATGC TGGACCTGGG GCACGACCGG
GGCTGGTTCG ATTCGCCGCT GATCACGGCG CTGGCGATCG CGGCGGGGGT GTCGCTCGTG
TCGCTGCTGA TCTGGGAGCT GGGCGAGGCG CATCCGGTGG TGGATCTGAG CCTGTTCCGG
GAGCGGACCT TCACGTTCTG CGTGGTGATC ATCTCGCTGG GGATGATGAG CTTCTCGGTG
GTGGGGGTGG TGTTTCCGCT GTGGCTGCAG GCGGTGATGG GATACACGGC GTACCAGGCG
GGGCTGGCGA CGGCGTCGAT GGGGGTGCTG GCGCTGGTGT TCTCGATCCT GGTGGGGCTG
TACGCGAGCC GGGTGGACGC GCGGGTGCTG GTGACGTTCG GGTTCGGGGT GTTTGCGGCG
GTGATGTGGT GGAGCACGCA CTTCACGCTG TCGATGACGT TCGCGCAGGT GGTGACGCCG
CGGCTGATTC AGGGGATGGG GCTGCCGTGC TTCTTCATAC CGCTGACGGC GGCGACGCTG
TCGCGGGTGC CGGACGAGAA GCTGGCGGCG GCGTCGAGCC TGTCGAACTT CCTGCGGACG
CTGTCGGCGG CGTTCGGCAC GGCGCTGAGC GTGACGTGGT GGGACAACCG GGCGACGTAC
CACTACGCGG TGGTGTCGCA ATCGGTGACG CGCGCCTCGG AGAACACGCA GCGGTACGTG
GACGCGCTGC ACGCGATGGG GCTGCACGGC GCGCGGGAGC TGAGCTCGCT GCACCAGGTG
GTGCGGCAGC AGGCGTACAT GATGGCGACG AACGACATGT TCTACATGGC GAGCGCGACG
TGCCTGCTGC TGGCGGGGCT GATGTGGCTG ACGCGGCCGA AGCGGGGCGC GGCGGCGGCG
CTCGGGCACT GA
 
Protein sequence
MSAQAMSADQ AGVAPPAAAP LRGAKLALLT FALSLATFIE VLDSTVANVA VPAISGSLGV 
SNSQGTWVIS SYSVAAAIAV PLTGWLARRV GELRLFVASV ILFTLTSLLC GLARDLEVLV
ACRALQGLFS GPMVPLSQTI LMRAFPPARR TLALALWGMT VLLAPIFGPV VGGWLIDNFS
WPWIFLINLP IGLFSFAVCT LMLRPQAQRG EASPIDAPGI VLLVIGVGSL QAMLDLGHDR
GWFDSPLITA LAIAAGVSLV SLLIWELGEA HPVVDLSLFR ERTFTFCVVI ISLGMMSFSV
VGVVFPLWLQ AVMGYTAYQA GLATASMGVL ALVFSILVGL YASRVDARVL VTFGFGVFAA
VMWWSTHFTL SMTFAQVVTP RLIQGMGLPC FFIPLTAATL SRVPDEKLAA ASSLSNFLRT
LSAAFGTALS VTWWDNRATY HYAVVSQSVT RASENTQRYV DALHAMGLHG ARELSSLHQV
VRQQAYMMAT NDMFYMASAT CLLLAGLMWL TRPKRGAAAA LGH