Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1875 |
Symbol | |
ID | 3845398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 2271977 |
End bp | 2273443 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637839176 |
Product | multidrug resistance protein |
Protein accession | YP_440069 |
Protein GI | 83716678 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.371693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGGCA CGCACGCATG CGGCCCGAAG CCACCGACAC CCGAAGACAC CGACACCAAC GCCACCTTCA CCGTGTACAC GAGCGATTCA ACCGACACCG CCCCCGAGCA TCGAAGCCCG TCGGGCCGAT CCGCGACGGC TTGCGGGCCG GCCCGGCCGT TGCCGGCCGG CGCCACCGAC ATCACGCACG CGAAGACCTT GAACGATACC GCCACCGATA CCCCGCGCGC GAAGGCGCCC ACCGATCCGG CCGCCCTCGA CGGCGCGCAC GCGCAGCCCG TGCCGGCGCA CGAGCGCGGA TCGCCTCCGC CGCCGGAAGC CGCGGCGACG CTCGCCGCGC GCCGCGCGAC GCGCCGCCGG CGCTTCGCGC TGTTCTTCGG GCTGCTGGCG CTGGCCGCGC TGGCCGCGGG GCTCTACTGG TTCGTCGCCG GGCGCTTCAG CGAGGAGACG GACGACGCGT ACGTGGCCGG CAACGTGGTG CAGATCGCCG CGCAGATCCA GGGGACGGTG ACCGACGTGC TGGTGGCGGA CACGCAGCAG GTGAAGGCGG GGCAGGCGCT GGTGAAGCTC GACGACGCGG ACGCGTCGGC GGCGTTCGCG CAGGCGCGGG CGCAGCTCGC GCAGGCGGTG CGGCAGGTGG CGAACACGCG GCTCTCGATG GGGATGTACG AGGAGACGGT GAAGGCGCGC GAGGCGGACC TGAAGCTTGC GCAGCAGGCG TATCGGGCGC GAGCGGGGGC CTCGGTGGAG GTGGTCGCGC CGGAGGAACT GGCGCGGGCG AAGTCGTCGC TGGCGAACGC GCAGGCGGCG CTGGCGGGGG CGCAGGCGCA GCTGGAGGCG GCGCGCGCGC TGGGCAGCGA GCGGCCGGTC GAGCAGAACC CGGCGGTGCA GCAGGCGGCC GCGCAGTTCA AGCTGGCGTA CCGGAACCTG AGGCGCACGA CGATCGTGTC GCCGGTGGAC GGCACGGTCG GTCAGCGGTC GGTGCAGATC GGTCAGCAGG TGGGGCCGGG GGTGCCGCTG ATGTCGGTGG TGCAGTTGCG GCAGGTGTGG GTGGAGGCGA ACTTCAAGGA AGGGCAGATC CGGCACATGC GGGTGGGCCA GCCGGTGCGG CTCGAATCGG ACCTGTACGG CGCGCGGGTG ACGTACCACG GCCGGGTGGA GGGGTTCTCG GCGGGCACGG GCAGCGCGTT CTCGATGCTG CCGTCGCAGA ACGCGGCGGG GAACTGGATC AAGGTGGTGC AGCGCCTGCC GGTGGTGATC TCGCTGGAGC CGTTGGAGCT GGCGGCGCAC CCGCTGCGGG TGGGGCTGTC GATGCGCGCG ACGGTGGAGA CGAAGGTGCG TGGCGGCCGC CTGCTCGACG GCGACGCGCC GCTGCCGGGG CTGCGCACGC GGGTGCACGA AGCGCAGGCG GGCGAGGCCG AGGCCGCGGC TTCGGCAGTG ATTCGGGAGA ATGACGGCCG CAGGTGA
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Protein sequence | MSGTHACGPK PPTPEDTDTN ATFTVYTSDS TDTAPEHRSP SGRSATACGP ARPLPAGATD ITHAKTLNDT ATDTPRAKAP TDPAALDGAH AQPVPAHERG SPPPPEAAAT LAARRATRRR RFALFFGLLA LAALAAGLYW FVAGRFSEET DDAYVAGNVV QIAAQIQGTV TDVLVADTQQ VKAGQALVKL DDADASAAFA QARAQLAQAV RQVANTRLSM GMYEETVKAR EADLKLAQQA YRARAGASVE VVAPEELARA KSSLANAQAA LAGAQAQLEA ARALGSERPV EQNPAVQQAA AQFKLAYRNL RRTTIVSPVD GTVGQRSVQI GQQVGPGVPL MSVVQLRQVW VEANFKEGQI RHMRVGQPVR LESDLYGARV TYHGRVEGFS AGTGSAFSML PSQNAAGNWI KVVQRLPVVI SLEPLELAAH PLRVGLSMRA TVETKVRGGR LLDGDAPLPG LRTRVHEAQA GEAEAAASAV IRENDGRR
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