Gene BTH_II1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1854 
Symbol 
ID3844469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp2244787 
End bp2245926 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content67% 
IMG OID637839155 
Productglycine betaine/L-proline ABC transporter, periplasmic glycine betaine/L-proline-binding protein 
Protein accessionYP_440048 
Protein GI83717137 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0466276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACTGG CAGCCGTTCC AGGATGCGAG CCAGCGTTAC ATGCGCAATC ACCTCGAGCT 
CGACGCGCTC GAGGCGACCG CGCGTTTTCC CCGTCCGCAC GCGTGACGCC CGGCGTTACG
CACTTTCAAA TGGAGCAAGC GATGAAGCGA TACGAATCCA TTGCGCGGCG GCTCGCGCGC
CGCGCGGCAG CCGCATTGCC GGCGTTCGCG ACGTTGTCAT GGTGCGCCAC GGCGGCCACC
GCCACGACCC CGGCAGCCGC GGCGGAGCCG GCCGCCTGCC GCGACGTGCG GATGGCCGGC
CCGGGCTGGA CCGACATCGA AGCGACGAAC GCGCTCGCGG GCGTCGTGCT GAAGGCGCTC
GGTTACCGGC AGAGCGTGTC GAACCTGTCG GTGCCGATCA CGTATCAAGG TCTGAAGAAA
GGGCAGATCG ACGTGTTTCT CGGCAACTGG ATGCCGGCGC AGGCGCCGCT CGTCAAGCCG
TTCGTCGACG CGCGCACGAT CGACGTGCTC CACGCGAACC TGAGCCATGC GAAATTCACG
CTCGCGGTGC CGGACTACGT GGCGGCAGCG GGCGTGCATT CGTTCGCCGA CCTCGCGAAG
TACGCGCAGC GCTTCGGCGC GAAGATCTAC GGCATCGAGC CGGGCGCGCC GGCCAATCAG
AGCATCTCGC GGATGCTCGC CGACAAGGCG CTCGGGCCGG CGAACTGGCA ACTCGTCGAA
TCGAGCGAGA CAGGGATGCT GACGCAGGTC GAGCGCGCGG TGCGCGAGCA CCAGTGGATC
GTGTTTCTCG GCTGGGAGCC GCATCTGATG AACACGAAGT TCCATCTCGT TTATCTGTCG
GGCGGCGACG CGTATTTCGG GCCGAACTAC GGCGGCGCGA CCGTCAACAC GGTCGCGCGC
GCGGATTTCG CGAACCAGTG CACGAATCTC ACGCGGCTGT TCCGACAAAT GACGTTCACC
GTCGATCTGG AGAACGGAAT GATCGCCGCG ATGCTGCGGG ACAAGCGCTC CGCTGTGGAT
GCCGCGCAAC ACGCGCTGCG TGCGAACCCG TCGCTCGTCG ATGCATGGCT CGACGGCGTG
ACCACCGCGA ACGGCGCGCC GGGCTTGCCT GCCGTGCGTG CGGCACTCGA CGCGCGGTGA
 
Protein sequence
MGLAAVPGCE PALHAQSPRA RRARGDRAFS PSARVTPGVT HFQMEQAMKR YESIARRLAR 
RAAAALPAFA TLSWCATAAT ATTPAAAAEP AACRDVRMAG PGWTDIEATN ALAGVVLKAL
GYRQSVSNLS VPITYQGLKK GQIDVFLGNW MPAQAPLVKP FVDARTIDVL HANLSHAKFT
LAVPDYVAAA GVHSFADLAK YAQRFGAKIY GIEPGAPANQ SISRMLADKA LGPANWQLVE
SSETGMLTQV ERAVREHQWI VFLGWEPHLM NTKFHLVYLS GGDAYFGPNY GGATVNTVAR
ADFANQCTNL TRLFRQMTFT VDLENGMIAA MLRDKRSAVD AAQHALRANP SLVDAWLDGV
TTANGAPGLP AVRAALDAR