Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1854 |
Symbol | |
ID | 3844469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 2244787 |
End bp | 2245926 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637839155 |
Product | glycine betaine/L-proline ABC transporter, periplasmic glycine betaine/L-proline-binding protein |
Protein accession | YP_440048 |
Protein GI | 83717137 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0466276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGACTGG CAGCCGTTCC AGGATGCGAG CCAGCGTTAC ATGCGCAATC ACCTCGAGCT CGACGCGCTC GAGGCGACCG CGCGTTTTCC CCGTCCGCAC GCGTGACGCC CGGCGTTACG CACTTTCAAA TGGAGCAAGC GATGAAGCGA TACGAATCCA TTGCGCGGCG GCTCGCGCGC CGCGCGGCAG CCGCATTGCC GGCGTTCGCG ACGTTGTCAT GGTGCGCCAC GGCGGCCACC GCCACGACCC CGGCAGCCGC GGCGGAGCCG GCCGCCTGCC GCGACGTGCG GATGGCCGGC CCGGGCTGGA CCGACATCGA AGCGACGAAC GCGCTCGCGG GCGTCGTGCT GAAGGCGCTC GGTTACCGGC AGAGCGTGTC GAACCTGTCG GTGCCGATCA CGTATCAAGG TCTGAAGAAA GGGCAGATCG ACGTGTTTCT CGGCAACTGG ATGCCGGCGC AGGCGCCGCT CGTCAAGCCG TTCGTCGACG CGCGCACGAT CGACGTGCTC CACGCGAACC TGAGCCATGC GAAATTCACG CTCGCGGTGC CGGACTACGT GGCGGCAGCG GGCGTGCATT CGTTCGCCGA CCTCGCGAAG TACGCGCAGC GCTTCGGCGC GAAGATCTAC GGCATCGAGC CGGGCGCGCC GGCCAATCAG AGCATCTCGC GGATGCTCGC CGACAAGGCG CTCGGGCCGG CGAACTGGCA ACTCGTCGAA TCGAGCGAGA CAGGGATGCT GACGCAGGTC GAGCGCGCGG TGCGCGAGCA CCAGTGGATC GTGTTTCTCG GCTGGGAGCC GCATCTGATG AACACGAAGT TCCATCTCGT TTATCTGTCG GGCGGCGACG CGTATTTCGG GCCGAACTAC GGCGGCGCGA CCGTCAACAC GGTCGCGCGC GCGGATTTCG CGAACCAGTG CACGAATCTC ACGCGGCTGT TCCGACAAAT GACGTTCACC GTCGATCTGG AGAACGGAAT GATCGCCGCG ATGCTGCGGG ACAAGCGCTC CGCTGTGGAT GCCGCGCAAC ACGCGCTGCG TGCGAACCCG TCGCTCGTCG ATGCATGGCT CGACGGCGTG ACCACCGCGA ACGGCGCGCC GGGCTTGCCT GCCGTGCGTG CGGCACTCGA CGCGCGGTGA
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Protein sequence | MGLAAVPGCE PALHAQSPRA RRARGDRAFS PSARVTPGVT HFQMEQAMKR YESIARRLAR RAAAALPAFA TLSWCATAAT ATTPAAAAEP AACRDVRMAG PGWTDIEATN ALAGVVLKAL GYRQSVSNLS VPITYQGLKK GQIDVFLGNW MPAQAPLVKP FVDARTIDVL HANLSHAKFT LAVPDYVAAA GVHSFADLAK YAQRFGAKIY GIEPGAPANQ SISRMLADKA LGPANWQLVE SSETGMLTQV ERAVREHQWI VFLGWEPHLM NTKFHLVYLS GGDAYFGPNY GGATVNTVAR ADFANQCTNL TRLFRQMTFT VDLENGMIAA MLRDKRSAVD AAQHALRANP SLVDAWLDGV TTANGAPGLP AVRAALDAR
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